PCR data and comparative performance of Bacteroidales microbial source tracking genetic markers

We reported modified endpoint PCR results analyzed by universal and human-, swine-, and cattle-specific Bacteroidales gene markers with human sewage and animal fecal samples (i.e., swine, cattle, chicken, goat, sheep, buffalo, and duck) from Tha Chin and Chao Phraya watersheds. Annealing locations o...

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Detalles Bibliográficos
Autores principales: Somnark, Pornjira, Chyerochana, Natcha, Kongprajug, Akechai, Mongkolsuk, Skorn, Sirikanchana, Kwanrawee
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Environmental Science
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5992956/
https://www.ncbi.nlm.nih.gov/pubmed/29892629
http://dx.doi.org/10.1016/j.dib.2018.04.129
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author Somnark, Pornjira
Chyerochana, Natcha
Kongprajug, Akechai
Mongkolsuk, Skorn
Sirikanchana, Kwanrawee
author_facet Somnark, Pornjira
Chyerochana, Natcha
Kongprajug, Akechai
Mongkolsuk, Skorn
Sirikanchana, Kwanrawee
author_sort Somnark, Pornjira
collection PubMed
description We reported modified endpoint PCR results analyzed by universal and human-, swine-, and cattle-specific Bacteroidales gene markers with human sewage and animal fecal samples (i.e., swine, cattle, chicken, goat, sheep, buffalo, and duck) from Tha Chin and Chao Phraya watersheds. Annealing locations of PCR primers were illustrated by maps of 16s rRNA Bacteroidales genes. We also summarized previously published work on the performance of the PCR assays. For further discussion of the data presented here, please refer to Somnark et al., Performance evaluation of Bacteroidales genetic markers for human and animal microbial source tracking in tropical agricultural watersheds, Environ. Pollut. 236 (2018) 100–110.
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spelling pubmed-59929562018-06-11 PCR data and comparative performance of Bacteroidales microbial source tracking genetic markers Somnark, Pornjira Chyerochana, Natcha Kongprajug, Akechai Mongkolsuk, Skorn Sirikanchana, Kwanrawee Data Brief Environmental Science We reported modified endpoint PCR results analyzed by universal and human-, swine-, and cattle-specific Bacteroidales gene markers with human sewage and animal fecal samples (i.e., swine, cattle, chicken, goat, sheep, buffalo, and duck) from Tha Chin and Chao Phraya watersheds. Annealing locations of PCR primers were illustrated by maps of 16s rRNA Bacteroidales genes. We also summarized previously published work on the performance of the PCR assays. For further discussion of the data presented here, please refer to Somnark et al., Performance evaluation of Bacteroidales genetic markers for human and animal microbial source tracking in tropical agricultural watersheds, Environ. Pollut. 236 (2018) 100–110. Elsevier 2018-05-05 /pmc/articles/PMC5992956/ /pubmed/29892629 http://dx.doi.org/10.1016/j.dib.2018.04.129 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Environmental Science
Somnark, Pornjira
Chyerochana, Natcha
Kongprajug, Akechai
Mongkolsuk, Skorn
Sirikanchana, Kwanrawee
PCR data and comparative performance of Bacteroidales microbial source tracking genetic markers
title PCR data and comparative performance of Bacteroidales microbial source tracking genetic markers
title_full PCR data and comparative performance of Bacteroidales microbial source tracking genetic markers
title_fullStr PCR data and comparative performance of Bacteroidales microbial source tracking genetic markers
title_full_unstemmed PCR data and comparative performance of Bacteroidales microbial source tracking genetic markers
title_short PCR data and comparative performance of Bacteroidales microbial source tracking genetic markers
title_sort pcr data and comparative performance of bacteroidales microbial source tracking genetic markers
topic Environmental Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5992956/
https://www.ncbi.nlm.nih.gov/pubmed/29892629
http://dx.doi.org/10.1016/j.dib.2018.04.129
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