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Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors

Gene expression in eukaryotes is controlled by DNA sequences at promoter and enhancer regions, whose accessibility for binding by regulatory proteins dictates their specific patterns of activity. Here, we identify the protein Zbtb7a as a factor required for inducible changes in accessibility driven...

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Autores principales: Ramos Pittol, José Miguel, Oruba, Agata, Mittler, Gerhard, Saccani, Simona, van Essen, Dominic
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5993293/
https://www.ncbi.nlm.nih.gov/pubmed/29813070
http://dx.doi.org/10.1371/journal.pbio.2004526
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author Ramos Pittol, José Miguel
Oruba, Agata
Mittler, Gerhard
Saccani, Simona
van Essen, Dominic
author_facet Ramos Pittol, José Miguel
Oruba, Agata
Mittler, Gerhard
Saccani, Simona
van Essen, Dominic
author_sort Ramos Pittol, José Miguel
collection PubMed
description Gene expression in eukaryotes is controlled by DNA sequences at promoter and enhancer regions, whose accessibility for binding by regulatory proteins dictates their specific patterns of activity. Here, we identify the protein Zbtb7a as a factor required for inducible changes in accessibility driven by transcription factors (TFs). We show that Zbtb7a binds to a significant fraction of genomic promoters and enhancers, encompassing many target genes of nuclear factor kappa B (NFκB) p65 and a variety of other TFs. While Zbtb7a binding is not alone sufficient to directly activate promoters, it is required to enable TF-dependent control of accessibility and normal gene expression. Using p65 as a model TF, we show that Zbtb7a associates with promoters independently of client TF binding. Moreover, the presence of prebound Zbtb7a can specify promoters that are amenable to TF-induced changes in accessibility. Therefore, Zbtb7a represents a widely used promoter factor that transduces signals from other TFs to enable control of accessibility and regulation of gene expression.
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spelling pubmed-59932932018-06-17 Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors Ramos Pittol, José Miguel Oruba, Agata Mittler, Gerhard Saccani, Simona van Essen, Dominic PLoS Biol Research Article Gene expression in eukaryotes is controlled by DNA sequences at promoter and enhancer regions, whose accessibility for binding by regulatory proteins dictates their specific patterns of activity. Here, we identify the protein Zbtb7a as a factor required for inducible changes in accessibility driven by transcription factors (TFs). We show that Zbtb7a binds to a significant fraction of genomic promoters and enhancers, encompassing many target genes of nuclear factor kappa B (NFκB) p65 and a variety of other TFs. While Zbtb7a binding is not alone sufficient to directly activate promoters, it is required to enable TF-dependent control of accessibility and normal gene expression. Using p65 as a model TF, we show that Zbtb7a associates with promoters independently of client TF binding. Moreover, the presence of prebound Zbtb7a can specify promoters that are amenable to TF-induced changes in accessibility. Therefore, Zbtb7a represents a widely used promoter factor that transduces signals from other TFs to enable control of accessibility and regulation of gene expression. Public Library of Science 2018-05-29 /pmc/articles/PMC5993293/ /pubmed/29813070 http://dx.doi.org/10.1371/journal.pbio.2004526 Text en © 2018 Ramos Pittol et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Ramos Pittol, José Miguel
Oruba, Agata
Mittler, Gerhard
Saccani, Simona
van Essen, Dominic
Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors
title Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors
title_full Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors
title_fullStr Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors
title_full_unstemmed Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors
title_short Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors
title_sort zbtb7a is a transducer for the control of promoter accessibility by nf-kappa b and multiple other transcription factors
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5993293/
https://www.ncbi.nlm.nih.gov/pubmed/29813070
http://dx.doi.org/10.1371/journal.pbio.2004526
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