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Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors
Gene expression in eukaryotes is controlled by DNA sequences at promoter and enhancer regions, whose accessibility for binding by regulatory proteins dictates their specific patterns of activity. Here, we identify the protein Zbtb7a as a factor required for inducible changes in accessibility driven...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5993293/ https://www.ncbi.nlm.nih.gov/pubmed/29813070 http://dx.doi.org/10.1371/journal.pbio.2004526 |
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author | Ramos Pittol, José Miguel Oruba, Agata Mittler, Gerhard Saccani, Simona van Essen, Dominic |
author_facet | Ramos Pittol, José Miguel Oruba, Agata Mittler, Gerhard Saccani, Simona van Essen, Dominic |
author_sort | Ramos Pittol, José Miguel |
collection | PubMed |
description | Gene expression in eukaryotes is controlled by DNA sequences at promoter and enhancer regions, whose accessibility for binding by regulatory proteins dictates their specific patterns of activity. Here, we identify the protein Zbtb7a as a factor required for inducible changes in accessibility driven by transcription factors (TFs). We show that Zbtb7a binds to a significant fraction of genomic promoters and enhancers, encompassing many target genes of nuclear factor kappa B (NFκB) p65 and a variety of other TFs. While Zbtb7a binding is not alone sufficient to directly activate promoters, it is required to enable TF-dependent control of accessibility and normal gene expression. Using p65 as a model TF, we show that Zbtb7a associates with promoters independently of client TF binding. Moreover, the presence of prebound Zbtb7a can specify promoters that are amenable to TF-induced changes in accessibility. Therefore, Zbtb7a represents a widely used promoter factor that transduces signals from other TFs to enable control of accessibility and regulation of gene expression. |
format | Online Article Text |
id | pubmed-5993293 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-59932932018-06-17 Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors Ramos Pittol, José Miguel Oruba, Agata Mittler, Gerhard Saccani, Simona van Essen, Dominic PLoS Biol Research Article Gene expression in eukaryotes is controlled by DNA sequences at promoter and enhancer regions, whose accessibility for binding by regulatory proteins dictates their specific patterns of activity. Here, we identify the protein Zbtb7a as a factor required for inducible changes in accessibility driven by transcription factors (TFs). We show that Zbtb7a binds to a significant fraction of genomic promoters and enhancers, encompassing many target genes of nuclear factor kappa B (NFκB) p65 and a variety of other TFs. While Zbtb7a binding is not alone sufficient to directly activate promoters, it is required to enable TF-dependent control of accessibility and normal gene expression. Using p65 as a model TF, we show that Zbtb7a associates with promoters independently of client TF binding. Moreover, the presence of prebound Zbtb7a can specify promoters that are amenable to TF-induced changes in accessibility. Therefore, Zbtb7a represents a widely used promoter factor that transduces signals from other TFs to enable control of accessibility and regulation of gene expression. Public Library of Science 2018-05-29 /pmc/articles/PMC5993293/ /pubmed/29813070 http://dx.doi.org/10.1371/journal.pbio.2004526 Text en © 2018 Ramos Pittol et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Ramos Pittol, José Miguel Oruba, Agata Mittler, Gerhard Saccani, Simona van Essen, Dominic Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors |
title | Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors |
title_full | Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors |
title_fullStr | Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors |
title_full_unstemmed | Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors |
title_short | Zbtb7a is a transducer for the control of promoter accessibility by NF-kappa B and multiple other transcription factors |
title_sort | zbtb7a is a transducer for the control of promoter accessibility by nf-kappa b and multiple other transcription factors |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5993293/ https://www.ncbi.nlm.nih.gov/pubmed/29813070 http://dx.doi.org/10.1371/journal.pbio.2004526 |
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