Cargando…

Global miRNA expression profile reveals novel molecular players in aneurysmal subarachnoid haemorrhage

The molecular mechanisms behind aneurysmal subarachnoid haemorrhage (aSAH) are still poorly understood. Expression patterns of miRNAs may help elucidate the post-transcriptional gene expression in aSAH. Here, we evaluate the global miRNAs expression profile (miRnome) of patients with aSAH to identif...

Descripción completa

Detalles Bibliográficos
Autores principales: Lopes, Katia de Paiva, Vinasco-Sandoval, Tatiana, Vialle, Ricardo Assunção, Paschoal, Fernando Mendes, Bastos, Vanessa Albuquerque P. Aviz, Bor-Seng-Shu, Edson, Teixeira, Manoel Jacobsen, Yamada, Elizabeth Sumi, Pinto, Pablo, Vidal, Amanda Ferreira, Ribeiro-dos-Santos, Arthur, Moreira, Fabiano, Santos, Sidney, Paschoal, Eric Homero Albuquerque, Ribeiro-dos-Santos, Ândrea
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5993784/
https://www.ncbi.nlm.nih.gov/pubmed/29884860
http://dx.doi.org/10.1038/s41598-018-27078-w
_version_ 1783330281448538112
author Lopes, Katia de Paiva
Vinasco-Sandoval, Tatiana
Vialle, Ricardo Assunção
Paschoal, Fernando Mendes
Bastos, Vanessa Albuquerque P. Aviz
Bor-Seng-Shu, Edson
Teixeira, Manoel Jacobsen
Yamada, Elizabeth Sumi
Pinto, Pablo
Vidal, Amanda Ferreira
Ribeiro-dos-Santos, Arthur
Moreira, Fabiano
Santos, Sidney
Paschoal, Eric Homero Albuquerque
Ribeiro-dos-Santos, Ândrea
author_facet Lopes, Katia de Paiva
Vinasco-Sandoval, Tatiana
Vialle, Ricardo Assunção
Paschoal, Fernando Mendes
Bastos, Vanessa Albuquerque P. Aviz
Bor-Seng-Shu, Edson
Teixeira, Manoel Jacobsen
Yamada, Elizabeth Sumi
Pinto, Pablo
Vidal, Amanda Ferreira
Ribeiro-dos-Santos, Arthur
Moreira, Fabiano
Santos, Sidney
Paschoal, Eric Homero Albuquerque
Ribeiro-dos-Santos, Ândrea
author_sort Lopes, Katia de Paiva
collection PubMed
description The molecular mechanisms behind aneurysmal subarachnoid haemorrhage (aSAH) are still poorly understood. Expression patterns of miRNAs may help elucidate the post-transcriptional gene expression in aSAH. Here, we evaluate the global miRNAs expression profile (miRnome) of patients with aSAH to identify potential biomarkers. We collected 33 peripheral blood samples (27 patients with cerebral aneurysm, collected 7 to 10 days after the haemorrhage, when usually is the cerebral vasospasm risk peak, and six controls). Then, were performed small RNA sequencing using an Illumina Next Generation Sequencing (NGS) platform. Differential expression analysis identified eight differentially expressed miRNAs. Among them, three were identified being up-regulated, and five down-regulated. miR-486-5p was the most abundant expressed and is associated with poor neurological admission status. In silico miRNA gene target prediction showed 148 genes associated with at least two differentially expressed miRNAs. Among these, THBS1 and VEGFA, known to be related to thrombospondin and vascular endothelial growth factor. Moreover, MYC gene was found to be regulated by four miRNAs, suggesting an important role in aneurysmal subarachnoid haemorrhage. Additionally, 15 novel miRNAs were predicted being expressed only in aSAH, suggesting possible involvement in aneurysm pathogenesis. These findings may help the identification of novel biomarkers of clinical interest.
format Online
Article
Text
id pubmed-5993784
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-59937842018-06-21 Global miRNA expression profile reveals novel molecular players in aneurysmal subarachnoid haemorrhage Lopes, Katia de Paiva Vinasco-Sandoval, Tatiana Vialle, Ricardo Assunção Paschoal, Fernando Mendes Bastos, Vanessa Albuquerque P. Aviz Bor-Seng-Shu, Edson Teixeira, Manoel Jacobsen Yamada, Elizabeth Sumi Pinto, Pablo Vidal, Amanda Ferreira Ribeiro-dos-Santos, Arthur Moreira, Fabiano Santos, Sidney Paschoal, Eric Homero Albuquerque Ribeiro-dos-Santos, Ândrea Sci Rep Article The molecular mechanisms behind aneurysmal subarachnoid haemorrhage (aSAH) are still poorly understood. Expression patterns of miRNAs may help elucidate the post-transcriptional gene expression in aSAH. Here, we evaluate the global miRNAs expression profile (miRnome) of patients with aSAH to identify potential biomarkers. We collected 33 peripheral blood samples (27 patients with cerebral aneurysm, collected 7 to 10 days after the haemorrhage, when usually is the cerebral vasospasm risk peak, and six controls). Then, were performed small RNA sequencing using an Illumina Next Generation Sequencing (NGS) platform. Differential expression analysis identified eight differentially expressed miRNAs. Among them, three were identified being up-regulated, and five down-regulated. miR-486-5p was the most abundant expressed and is associated with poor neurological admission status. In silico miRNA gene target prediction showed 148 genes associated with at least two differentially expressed miRNAs. Among these, THBS1 and VEGFA, known to be related to thrombospondin and vascular endothelial growth factor. Moreover, MYC gene was found to be regulated by four miRNAs, suggesting an important role in aneurysmal subarachnoid haemorrhage. Additionally, 15 novel miRNAs were predicted being expressed only in aSAH, suggesting possible involvement in aneurysm pathogenesis. These findings may help the identification of novel biomarkers of clinical interest. Nature Publishing Group UK 2018-06-08 /pmc/articles/PMC5993784/ /pubmed/29884860 http://dx.doi.org/10.1038/s41598-018-27078-w Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Lopes, Katia de Paiva
Vinasco-Sandoval, Tatiana
Vialle, Ricardo Assunção
Paschoal, Fernando Mendes
Bastos, Vanessa Albuquerque P. Aviz
Bor-Seng-Shu, Edson
Teixeira, Manoel Jacobsen
Yamada, Elizabeth Sumi
Pinto, Pablo
Vidal, Amanda Ferreira
Ribeiro-dos-Santos, Arthur
Moreira, Fabiano
Santos, Sidney
Paschoal, Eric Homero Albuquerque
Ribeiro-dos-Santos, Ândrea
Global miRNA expression profile reveals novel molecular players in aneurysmal subarachnoid haemorrhage
title Global miRNA expression profile reveals novel molecular players in aneurysmal subarachnoid haemorrhage
title_full Global miRNA expression profile reveals novel molecular players in aneurysmal subarachnoid haemorrhage
title_fullStr Global miRNA expression profile reveals novel molecular players in aneurysmal subarachnoid haemorrhage
title_full_unstemmed Global miRNA expression profile reveals novel molecular players in aneurysmal subarachnoid haemorrhage
title_short Global miRNA expression profile reveals novel molecular players in aneurysmal subarachnoid haemorrhage
title_sort global mirna expression profile reveals novel molecular players in aneurysmal subarachnoid haemorrhage
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5993784/
https://www.ncbi.nlm.nih.gov/pubmed/29884860
http://dx.doi.org/10.1038/s41598-018-27078-w
work_keys_str_mv AT lopeskatiadepaiva globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT vinascosandovaltatiana globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT viallericardoassuncao globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT paschoalfernandomendes globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT bastosvanessaalbuquerquepaviz globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT borsengshuedson globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT teixeiramanoeljacobsen globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT yamadaelizabethsumi globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT pintopablo globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT vidalamandaferreira globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT ribeirodossantosarthur globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT moreirafabiano globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT santossidney globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT paschoalerichomeroalbuquerque globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage
AT ribeirodossantosandrea globalmirnaexpressionprofilerevealsnovelmolecularplayersinaneurysmalsubarachnoidhaemorrhage