Cargando…

Insights into Brevibacillus borstelensis AK1 through Whole Genome Sequencing: A Thermophilic Bacterium Isolated from a Hot Spring in Saudi Arabia

Brevibacillus borstelensis AK1 is a thermophile which grows between the temperatures of 45°C and 70°C. The present study is an extended genome report of B. borstelensis AK1 along with the morphological characterization. The strain is isolated from a hot spring in Saudi Arabia (southeast of the city...

Descripción completa

Detalles Bibliográficos
Autores principales: Khalil, Amjad B., Sivakumar, Neelamegam, Arslan, Muhammad, Saleem, Hamna, Qarawi, Sami
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5994324/
https://www.ncbi.nlm.nih.gov/pubmed/29992154
http://dx.doi.org/10.1155/2018/5862437
_version_ 1783330424494227456
author Khalil, Amjad B.
Sivakumar, Neelamegam
Arslan, Muhammad
Saleem, Hamna
Qarawi, Sami
author_facet Khalil, Amjad B.
Sivakumar, Neelamegam
Arslan, Muhammad
Saleem, Hamna
Qarawi, Sami
author_sort Khalil, Amjad B.
collection PubMed
description Brevibacillus borstelensis AK1 is a thermophile which grows between the temperatures of 45°C and 70°C. The present study is an extended genome report of B. borstelensis AK1 along with the morphological characterization. The strain is isolated from a hot spring in Saudi Arabia (southeast of the city Gazan). It is observed that the strain AK1 is rod-shaped, motile, and strictly aerobic bacterium. The whole genome sequence resulted in 29 contigs with a total length of 5,155,092 bp. In total, 3,946 protein-coding genes and 139 RNA genes were identified. Comparison with the previously submitted strains of B. borstelensis strains illustrates that strain AK1 has a small genome size but high GC content. The strain possesses putative genes for degradation of a wide range of substrates including polyethylene (plastic) and long-chain hydrocarbons. These genomic features may be useful for future environmental/biotechnological applications.
format Online
Article
Text
id pubmed-5994324
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-59943242018-07-10 Insights into Brevibacillus borstelensis AK1 through Whole Genome Sequencing: A Thermophilic Bacterium Isolated from a Hot Spring in Saudi Arabia Khalil, Amjad B. Sivakumar, Neelamegam Arslan, Muhammad Saleem, Hamna Qarawi, Sami Biomed Res Int Research Article Brevibacillus borstelensis AK1 is a thermophile which grows between the temperatures of 45°C and 70°C. The present study is an extended genome report of B. borstelensis AK1 along with the morphological characterization. The strain is isolated from a hot spring in Saudi Arabia (southeast of the city Gazan). It is observed that the strain AK1 is rod-shaped, motile, and strictly aerobic bacterium. The whole genome sequence resulted in 29 contigs with a total length of 5,155,092 bp. In total, 3,946 protein-coding genes and 139 RNA genes were identified. Comparison with the previously submitted strains of B. borstelensis strains illustrates that strain AK1 has a small genome size but high GC content. The strain possesses putative genes for degradation of a wide range of substrates including polyethylene (plastic) and long-chain hydrocarbons. These genomic features may be useful for future environmental/biotechnological applications. Hindawi 2018-05-24 /pmc/articles/PMC5994324/ /pubmed/29992154 http://dx.doi.org/10.1155/2018/5862437 Text en Copyright © 2018 Amjad B. Khalil et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Khalil, Amjad B.
Sivakumar, Neelamegam
Arslan, Muhammad
Saleem, Hamna
Qarawi, Sami
Insights into Brevibacillus borstelensis AK1 through Whole Genome Sequencing: A Thermophilic Bacterium Isolated from a Hot Spring in Saudi Arabia
title Insights into Brevibacillus borstelensis AK1 through Whole Genome Sequencing: A Thermophilic Bacterium Isolated from a Hot Spring in Saudi Arabia
title_full Insights into Brevibacillus borstelensis AK1 through Whole Genome Sequencing: A Thermophilic Bacterium Isolated from a Hot Spring in Saudi Arabia
title_fullStr Insights into Brevibacillus borstelensis AK1 through Whole Genome Sequencing: A Thermophilic Bacterium Isolated from a Hot Spring in Saudi Arabia
title_full_unstemmed Insights into Brevibacillus borstelensis AK1 through Whole Genome Sequencing: A Thermophilic Bacterium Isolated from a Hot Spring in Saudi Arabia
title_short Insights into Brevibacillus borstelensis AK1 through Whole Genome Sequencing: A Thermophilic Bacterium Isolated from a Hot Spring in Saudi Arabia
title_sort insights into brevibacillus borstelensis ak1 through whole genome sequencing: a thermophilic bacterium isolated from a hot spring in saudi arabia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5994324/
https://www.ncbi.nlm.nih.gov/pubmed/29992154
http://dx.doi.org/10.1155/2018/5862437
work_keys_str_mv AT khalilamjadb insightsintobrevibacillusborstelensisak1throughwholegenomesequencingathermophilicbacteriumisolatedfromahotspringinsaudiarabia
AT sivakumarneelamegam insightsintobrevibacillusborstelensisak1throughwholegenomesequencingathermophilicbacteriumisolatedfromahotspringinsaudiarabia
AT arslanmuhammad insightsintobrevibacillusborstelensisak1throughwholegenomesequencingathermophilicbacteriumisolatedfromahotspringinsaudiarabia
AT saleemhamna insightsintobrevibacillusborstelensisak1throughwholegenomesequencingathermophilicbacteriumisolatedfromahotspringinsaudiarabia
AT qarawisami insightsintobrevibacillusborstelensisak1throughwholegenomesequencingathermophilicbacteriumisolatedfromahotspringinsaudiarabia