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Automated classification of optical coherence tomography images of human atrial tissue
Tissue composition of the atria plays a critical role in the pathology of cardiovascular disease, tissue remodeling, and arrhythmogenic substrates. Optical coherence tomography (OCT) has the ability to capture the tissue composition information of the human atria. In this study, we developed a regio...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Society of Photo-Optical Instrumentation Engineers
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5995000/ https://www.ncbi.nlm.nih.gov/pubmed/26926869 http://dx.doi.org/10.1117/1.JBO.21.10.101407 |
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author | Gan, Yu Tsay, David Amir, Syed B. Marboe, Charles C. Hendon, Christine P. |
author_facet | Gan, Yu Tsay, David Amir, Syed B. Marboe, Charles C. Hendon, Christine P. |
author_sort | Gan, Yu |
collection | PubMed |
description | Tissue composition of the atria plays a critical role in the pathology of cardiovascular disease, tissue remodeling, and arrhythmogenic substrates. Optical coherence tomography (OCT) has the ability to capture the tissue composition information of the human atria. In this study, we developed a region-based automated method to classify tissue compositions within human atria samples within OCT images. We segmented regional information without prior information about the tissue architecture and subsequently extracted features within each segmented region. A relevance vector machine model was used to perform automated classification. Segmentation of human atrial ex vivo datasets was correlated with trichrome histology and our classification algorithm had an average accuracy of 80.41% for identifying adipose, myocardium, fibrotic myocardium, and collagen tissue compositions. |
format | Online Article Text |
id | pubmed-5995000 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Society of Photo-Optical Instrumentation Engineers |
record_format | MEDLINE/PubMed |
spelling | pubmed-59950002018-06-13 Automated classification of optical coherence tomography images of human atrial tissue Gan, Yu Tsay, David Amir, Syed B. Marboe, Charles C. Hendon, Christine P. J Biomed Opt Special Section on Optical Diagnostic and Biophotonic Methods from Bench to Bedside Tissue composition of the atria plays a critical role in the pathology of cardiovascular disease, tissue remodeling, and arrhythmogenic substrates. Optical coherence tomography (OCT) has the ability to capture the tissue composition information of the human atria. In this study, we developed a region-based automated method to classify tissue compositions within human atria samples within OCT images. We segmented regional information without prior information about the tissue architecture and subsequently extracted features within each segmented region. A relevance vector machine model was used to perform automated classification. Segmentation of human atrial ex vivo datasets was correlated with trichrome histology and our classification algorithm had an average accuracy of 80.41% for identifying adipose, myocardium, fibrotic myocardium, and collagen tissue compositions. Society of Photo-Optical Instrumentation Engineers 2016-02-29 2016-10 /pmc/articles/PMC5995000/ /pubmed/26926869 http://dx.doi.org/10.1117/1.JBO.21.10.101407 Text en © The Authors. https://creativecommons.org/licenses/by/3.0/ Published by SPIE under a Creative Commons Attribution 3.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI. |
spellingShingle | Special Section on Optical Diagnostic and Biophotonic Methods from Bench to Bedside Gan, Yu Tsay, David Amir, Syed B. Marboe, Charles C. Hendon, Christine P. Automated classification of optical coherence tomography images of human atrial tissue |
title | Automated classification of optical coherence tomography images of human atrial tissue |
title_full | Automated classification of optical coherence tomography images of human atrial tissue |
title_fullStr | Automated classification of optical coherence tomography images of human atrial tissue |
title_full_unstemmed | Automated classification of optical coherence tomography images of human atrial tissue |
title_short | Automated classification of optical coherence tomography images of human atrial tissue |
title_sort | automated classification of optical coherence tomography images of human atrial tissue |
topic | Special Section on Optical Diagnostic and Biophotonic Methods from Bench to Bedside |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5995000/ https://www.ncbi.nlm.nih.gov/pubmed/26926869 http://dx.doi.org/10.1117/1.JBO.21.10.101407 |
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