Cargando…

Automated classification of optical coherence tomography images of human atrial tissue

Tissue composition of the atria plays a critical role in the pathology of cardiovascular disease, tissue remodeling, and arrhythmogenic substrates. Optical coherence tomography (OCT) has the ability to capture the tissue composition information of the human atria. In this study, we developed a regio...

Descripción completa

Detalles Bibliográficos
Autores principales: Gan, Yu, Tsay, David, Amir, Syed B., Marboe, Charles C., Hendon, Christine P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Society of Photo-Optical Instrumentation Engineers 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5995000/
https://www.ncbi.nlm.nih.gov/pubmed/26926869
http://dx.doi.org/10.1117/1.JBO.21.10.101407
_version_ 1783330539095195648
author Gan, Yu
Tsay, David
Amir, Syed B.
Marboe, Charles C.
Hendon, Christine P.
author_facet Gan, Yu
Tsay, David
Amir, Syed B.
Marboe, Charles C.
Hendon, Christine P.
author_sort Gan, Yu
collection PubMed
description Tissue composition of the atria plays a critical role in the pathology of cardiovascular disease, tissue remodeling, and arrhythmogenic substrates. Optical coherence tomography (OCT) has the ability to capture the tissue composition information of the human atria. In this study, we developed a region-based automated method to classify tissue compositions within human atria samples within OCT images. We segmented regional information without prior information about the tissue architecture and subsequently extracted features within each segmented region. A relevance vector machine model was used to perform automated classification. Segmentation of human atrial ex vivo datasets was correlated with trichrome histology and our classification algorithm had an average accuracy of 80.41% for identifying adipose, myocardium, fibrotic myocardium, and collagen tissue compositions.
format Online
Article
Text
id pubmed-5995000
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Society of Photo-Optical Instrumentation Engineers
record_format MEDLINE/PubMed
spelling pubmed-59950002018-06-13 Automated classification of optical coherence tomography images of human atrial tissue Gan, Yu Tsay, David Amir, Syed B. Marboe, Charles C. Hendon, Christine P. J Biomed Opt Special Section on Optical Diagnostic and Biophotonic Methods from Bench to Bedside Tissue composition of the atria plays a critical role in the pathology of cardiovascular disease, tissue remodeling, and arrhythmogenic substrates. Optical coherence tomography (OCT) has the ability to capture the tissue composition information of the human atria. In this study, we developed a region-based automated method to classify tissue compositions within human atria samples within OCT images. We segmented regional information without prior information about the tissue architecture and subsequently extracted features within each segmented region. A relevance vector machine model was used to perform automated classification. Segmentation of human atrial ex vivo datasets was correlated with trichrome histology and our classification algorithm had an average accuracy of 80.41% for identifying adipose, myocardium, fibrotic myocardium, and collagen tissue compositions. Society of Photo-Optical Instrumentation Engineers 2016-02-29 2016-10 /pmc/articles/PMC5995000/ /pubmed/26926869 http://dx.doi.org/10.1117/1.JBO.21.10.101407 Text en © The Authors. https://creativecommons.org/licenses/by/3.0/ Published by SPIE under a Creative Commons Attribution 3.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI.
spellingShingle Special Section on Optical Diagnostic and Biophotonic Methods from Bench to Bedside
Gan, Yu
Tsay, David
Amir, Syed B.
Marboe, Charles C.
Hendon, Christine P.
Automated classification of optical coherence tomography images of human atrial tissue
title Automated classification of optical coherence tomography images of human atrial tissue
title_full Automated classification of optical coherence tomography images of human atrial tissue
title_fullStr Automated classification of optical coherence tomography images of human atrial tissue
title_full_unstemmed Automated classification of optical coherence tomography images of human atrial tissue
title_short Automated classification of optical coherence tomography images of human atrial tissue
title_sort automated classification of optical coherence tomography images of human atrial tissue
topic Special Section on Optical Diagnostic and Biophotonic Methods from Bench to Bedside
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5995000/
https://www.ncbi.nlm.nih.gov/pubmed/26926869
http://dx.doi.org/10.1117/1.JBO.21.10.101407
work_keys_str_mv AT ganyu automatedclassificationofopticalcoherencetomographyimagesofhumanatrialtissue
AT tsaydavid automatedclassificationofopticalcoherencetomographyimagesofhumanatrialtissue
AT amirsyedb automatedclassificationofopticalcoherencetomographyimagesofhumanatrialtissue
AT marboecharlesc automatedclassificationofopticalcoherencetomographyimagesofhumanatrialtissue
AT hendonchristinep automatedclassificationofopticalcoherencetomographyimagesofhumanatrialtissue