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Microstructural data of six recent brachiopod species: SEM, EBSD, morphometric and statistical analyses
Here, we provide the dataset associated with the research article “Mapping of recent brachiopod microstructure: A tool for environmental studies” [1]. We present original data relative to morphometric and statistical analyses performed on the basic shell structural units (the secondary layer fibres)...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5995785/ https://www.ncbi.nlm.nih.gov/pubmed/29896518 http://dx.doi.org/10.1016/j.dib.2018.02.071 |
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author | Ye, Facheng Crippa, Gaia Garbelli, Claudio Griesshaber, Erika |
author_facet | Ye, Facheng Crippa, Gaia Garbelli, Claudio Griesshaber, Erika |
author_sort | Ye, Facheng |
collection | PubMed |
description | Here, we provide the dataset associated with the research article “Mapping of recent brachiopod microstructure: A tool for environmental studies” [1]. We present original data relative to morphometric and statistical analyses performed on the basic shell structural units (the secondary layer fibres) of brachiopod shells belonging to six extant species adapted to different environmental conditions. Based on SEM micrographs of the secondary layer, fibres from ventral and dorsal valves, and from different shell positions, showing regular and symmetrical cross sectional outlines, were chosen for morphometric measurements using Adobe Photoshop CS6, Image-Pro Plus 6.0 and ImageJ. To work out the reliability of the measurements, the most significant parameters were tested for their probability density by distribution plots; for data visualization and dimension reduction, principal component analysis (PCA) was performed using R 3.3.0 [2] and independent-samples t-tests were performed using SPSS Statistics (IBM Version 22.0. Armonk, NY). Besides a quantitative analysis, a qualitative description of the shell microstructure is provided by detailed SEM imaging and EBSD measurements. |
format | Online Article Text |
id | pubmed-5995785 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-59957852018-06-12 Microstructural data of six recent brachiopod species: SEM, EBSD, morphometric and statistical analyses Ye, Facheng Crippa, Gaia Garbelli, Claudio Griesshaber, Erika Data Brief Cell biology Here, we provide the dataset associated with the research article “Mapping of recent brachiopod microstructure: A tool for environmental studies” [1]. We present original data relative to morphometric and statistical analyses performed on the basic shell structural units (the secondary layer fibres) of brachiopod shells belonging to six extant species adapted to different environmental conditions. Based on SEM micrographs of the secondary layer, fibres from ventral and dorsal valves, and from different shell positions, showing regular and symmetrical cross sectional outlines, were chosen for morphometric measurements using Adobe Photoshop CS6, Image-Pro Plus 6.0 and ImageJ. To work out the reliability of the measurements, the most significant parameters were tested for their probability density by distribution plots; for data visualization and dimension reduction, principal component analysis (PCA) was performed using R 3.3.0 [2] and independent-samples t-tests were performed using SPSS Statistics (IBM Version 22.0. Armonk, NY). Besides a quantitative analysis, a qualitative description of the shell microstructure is provided by detailed SEM imaging and EBSD measurements. Elsevier 2018-03-06 /pmc/articles/PMC5995785/ /pubmed/29896518 http://dx.doi.org/10.1016/j.dib.2018.02.071 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Cell biology Ye, Facheng Crippa, Gaia Garbelli, Claudio Griesshaber, Erika Microstructural data of six recent brachiopod species: SEM, EBSD, morphometric and statistical analyses |
title | Microstructural data of six recent brachiopod species: SEM, EBSD, morphometric and statistical analyses |
title_full | Microstructural data of six recent brachiopod species: SEM, EBSD, morphometric and statistical analyses |
title_fullStr | Microstructural data of six recent brachiopod species: SEM, EBSD, morphometric and statistical analyses |
title_full_unstemmed | Microstructural data of six recent brachiopod species: SEM, EBSD, morphometric and statistical analyses |
title_short | Microstructural data of six recent brachiopod species: SEM, EBSD, morphometric and statistical analyses |
title_sort | microstructural data of six recent brachiopod species: sem, ebsd, morphometric and statistical analyses |
topic | Cell biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5995785/ https://www.ncbi.nlm.nih.gov/pubmed/29896518 http://dx.doi.org/10.1016/j.dib.2018.02.071 |
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