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Physicochemical Drivers of Microbial Community Structure in Sediments of Lake Hazen, Nunavut, Canada

The Arctic is undergoing rapid environmental change, potentially affecting the physicochemical constraints of microbial communities that play a large role in both carbon and nutrient cycling in lacustrine environments. However, the microbial communities in such Arctic environments have seldom been s...

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Autores principales: Ruuskanen, Matti O., St. Pierre, Kyra A., St. Louis, Vincent L., Aris-Brosou, Stéphane, Poulain, Alexandre J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5996194/
https://www.ncbi.nlm.nih.gov/pubmed/29922252
http://dx.doi.org/10.3389/fmicb.2018.01138
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author Ruuskanen, Matti O.
St. Pierre, Kyra A.
St. Louis, Vincent L.
Aris-Brosou, Stéphane
Poulain, Alexandre J.
author_facet Ruuskanen, Matti O.
St. Pierre, Kyra A.
St. Louis, Vincent L.
Aris-Brosou, Stéphane
Poulain, Alexandre J.
author_sort Ruuskanen, Matti O.
collection PubMed
description The Arctic is undergoing rapid environmental change, potentially affecting the physicochemical constraints of microbial communities that play a large role in both carbon and nutrient cycling in lacustrine environments. However, the microbial communities in such Arctic environments have seldom been studied, and the drivers of their composition are poorly characterized. To address these gaps, we surveyed the biologically active surface sediments in Lake Hazen, the largest lake by volume north of the Arctic Circle, and a small lake and shoreline pond in its watershed. High-throughput amplicon sequencing of the 16S rRNA gene uncovered a community dominated by Proteobacteria, Bacteroidetes, and Chloroflexi, similar to those found in other cold and oligotrophic lake sediments. We also show that the microbial community structure in this Arctic polar desert is shaped by pH and redox gradients. This study lays the groundwork for predicting how sediment microbial communities in the Arctic could respond as climate change proceeds to alter their physicochemical constraints.
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spelling pubmed-59961942018-06-19 Physicochemical Drivers of Microbial Community Structure in Sediments of Lake Hazen, Nunavut, Canada Ruuskanen, Matti O. St. Pierre, Kyra A. St. Louis, Vincent L. Aris-Brosou, Stéphane Poulain, Alexandre J. Front Microbiol Microbiology The Arctic is undergoing rapid environmental change, potentially affecting the physicochemical constraints of microbial communities that play a large role in both carbon and nutrient cycling in lacustrine environments. However, the microbial communities in such Arctic environments have seldom been studied, and the drivers of their composition are poorly characterized. To address these gaps, we surveyed the biologically active surface sediments in Lake Hazen, the largest lake by volume north of the Arctic Circle, and a small lake and shoreline pond in its watershed. High-throughput amplicon sequencing of the 16S rRNA gene uncovered a community dominated by Proteobacteria, Bacteroidetes, and Chloroflexi, similar to those found in other cold and oligotrophic lake sediments. We also show that the microbial community structure in this Arctic polar desert is shaped by pH and redox gradients. This study lays the groundwork for predicting how sediment microbial communities in the Arctic could respond as climate change proceeds to alter their physicochemical constraints. Frontiers Media S.A. 2018-06-05 /pmc/articles/PMC5996194/ /pubmed/29922252 http://dx.doi.org/10.3389/fmicb.2018.01138 Text en Copyright © 2018 Ruuskanen, St. Pierre, St. Louis, Aris-Brosou and Poulain. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Ruuskanen, Matti O.
St. Pierre, Kyra A.
St. Louis, Vincent L.
Aris-Brosou, Stéphane
Poulain, Alexandre J.
Physicochemical Drivers of Microbial Community Structure in Sediments of Lake Hazen, Nunavut, Canada
title Physicochemical Drivers of Microbial Community Structure in Sediments of Lake Hazen, Nunavut, Canada
title_full Physicochemical Drivers of Microbial Community Structure in Sediments of Lake Hazen, Nunavut, Canada
title_fullStr Physicochemical Drivers of Microbial Community Structure in Sediments of Lake Hazen, Nunavut, Canada
title_full_unstemmed Physicochemical Drivers of Microbial Community Structure in Sediments of Lake Hazen, Nunavut, Canada
title_short Physicochemical Drivers of Microbial Community Structure in Sediments of Lake Hazen, Nunavut, Canada
title_sort physicochemical drivers of microbial community structure in sediments of lake hazen, nunavut, canada
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5996194/
https://www.ncbi.nlm.nih.gov/pubmed/29922252
http://dx.doi.org/10.3389/fmicb.2018.01138
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