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Transcriptome data of peripheral white blood cells from beef heifers collected at the time of artificial insemination

The reproductive performance of heifers within their first breeding season influences the success of beef cattle operations. Therefore, a means to identify infertile and late breeding heifers before the start of the breeding season holds great promise for the future of the beef industry. Pubertal be...

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Detalles Bibliográficos
Autores principales: Dickinson, Sarah E., Biase, Fernando H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5996294/
https://www.ncbi.nlm.nih.gov/pubmed/29900224
http://dx.doi.org/10.1016/j.dib.2018.03.062
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author Dickinson, Sarah E.
Biase, Fernando H.
author_facet Dickinson, Sarah E.
Biase, Fernando H.
author_sort Dickinson, Sarah E.
collection PubMed
description The reproductive performance of heifers within their first breeding season influences the success of beef cattle operations. Therefore, a means to identify infertile and late breeding heifers before the start of the breeding season holds great promise for the future of the beef industry. Pubertal beef heifers were subjected to estrous synchronization and fixed time artificial insemination (FTAI). We collected peripheral blood from the heifers at the time of artificial insemination (AI) and generated RNA sequencing data to characterize the transcriptome of peripheral white blood cells (PWBC). Following insemination, heifers were exposed to natural service for a defined breeding season, and pregnancy was evaluated to classify heifers into one of three groups: AI-pregnant, natural-bred (NB) pregnant, and non-pregnant. The raw transcriptome data of PWBC is available on the NCBI GEO repository (GSE103628) where the reader can also find raw read counts and normalized gene expression data. The normalized data on transcript coverage can be visualized as a genome browser at HeiferFertilityRNAseq.org.
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spelling pubmed-59962942018-06-13 Transcriptome data of peripheral white blood cells from beef heifers collected at the time of artificial insemination Dickinson, Sarah E. Biase, Fernando H. Data Brief Genetics, Genomics and Molecular Biology    The reproductive performance of heifers within their first breeding season influences the success of beef cattle operations. Therefore, a means to identify infertile and late breeding heifers before the start of the breeding season holds great promise for the future of the beef industry. Pubertal beef heifers were subjected to estrous synchronization and fixed time artificial insemination (FTAI). We collected peripheral blood from the heifers at the time of artificial insemination (AI) and generated RNA sequencing data to characterize the transcriptome of peripheral white blood cells (PWBC). Following insemination, heifers were exposed to natural service for a defined breeding season, and pregnancy was evaluated to classify heifers into one of three groups: AI-pregnant, natural-bred (NB) pregnant, and non-pregnant. The raw transcriptome data of PWBC is available on the NCBI GEO repository (GSE103628) where the reader can also find raw read counts and normalized gene expression data. The normalized data on transcript coverage can be visualized as a genome browser at HeiferFertilityRNAseq.org. Elsevier 2018-03-21 /pmc/articles/PMC5996294/ /pubmed/29900224 http://dx.doi.org/10.1016/j.dib.2018.03.062 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology   
Dickinson, Sarah E.
Biase, Fernando H.
Transcriptome data of peripheral white blood cells from beef heifers collected at the time of artificial insemination
title Transcriptome data of peripheral white blood cells from beef heifers collected at the time of artificial insemination
title_full Transcriptome data of peripheral white blood cells from beef heifers collected at the time of artificial insemination
title_fullStr Transcriptome data of peripheral white blood cells from beef heifers collected at the time of artificial insemination
title_full_unstemmed Transcriptome data of peripheral white blood cells from beef heifers collected at the time of artificial insemination
title_short Transcriptome data of peripheral white blood cells from beef heifers collected at the time of artificial insemination
title_sort transcriptome data of peripheral white blood cells from beef heifers collected at the time of artificial insemination
topic Genetics, Genomics and Molecular Biology   
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5996294/
https://www.ncbi.nlm.nih.gov/pubmed/29900224
http://dx.doi.org/10.1016/j.dib.2018.03.062
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