RNA-seq data of invasive ductal carcinoma and adjacent normal tissues from a Korean patient with breast cancer

Invasive ductal carcinoma is the most common type of breast cancer. Here, we provide a whole transcriptome shotgun sequencing (called RNA-seq) dataset conducted with ten samples of invasive ductal carcinoma tissue and three samples of adjacent normal tissue from a single Korean breast cancer patient...

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Detalles Bibliográficos
Autores principales: Hong, Ji Hyung, Ko, Yoon Ho, Kang, Keunsoo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Genetics, Genomics and Molecular Biology   
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5996721/
https://www.ncbi.nlm.nih.gov/pubmed/29900229
http://dx.doi.org/10.1016/j.dib.2018.03.079
Descripción
Sumario:Invasive ductal carcinoma is the most common type of breast cancer. Here, we provide a whole transcriptome shotgun sequencing (called RNA-seq) dataset conducted with ten samples of invasive ductal carcinoma tissue and three samples of adjacent normal tissue from a single Korean breast cancer patient (luminal B subtype). Differentially expressed genes (DEGs) were identified with a false discovery rate (FDR)-adjusted p-value of 0.05. Gene ontology analysis identified several key pathways, including lymphocyte activation. A list of differentially expressed genes is provided. The raw data was uploaded to the sequence read archive (SRA) database and the BioProject ID is PRJNA432903.

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