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Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata
Colletotrichum sansevieriae is an ascomycete fungus causing anthracnose disease on plants in the genus Sansevieria. Here, we report the draft genome sequence of isolate Sa-1–2 of this fungus. The genome size is >51 Mb, and the assembly consists of 8647 contigs and contains 13,664 predicted protei...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5996722/ https://www.ncbi.nlm.nih.gov/pubmed/29900221 http://dx.doi.org/10.1016/j.dib.2018.03.083 |
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author | Nakamura, Masayuki Fujikawa, Takashi Nakamori, Daichi Iwai, Hisashi |
author_facet | Nakamura, Masayuki Fujikawa, Takashi Nakamori, Daichi Iwai, Hisashi |
author_sort | Nakamura, Masayuki |
collection | PubMed |
description | Colletotrichum sansevieriae is an ascomycete fungus causing anthracnose disease on plants in the genus Sansevieria. Here, we report the draft genome sequence of isolate Sa-1–2 of this fungus. The genome size is >51 Mb, and the assembly consists of 8647 contigs and contains 13,664 predicted protein-coding genes. Pathogenicity factors such as plant cell wall-degrading enzymes and effector proteins were also predicted. Additionally, the phylogenetic relationship of isolates from different Colletotrichum spp. was analyzed, revealing that the isolate belongs to a novel major clade consisting of species that infect succulent plants originating from Africa. The draft genome sequence has been deposited at GenBank under accession number NJHP00000000. |
format | Online Article Text |
id | pubmed-5996722 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-59967222018-06-13 Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata Nakamura, Masayuki Fujikawa, Takashi Nakamori, Daichi Iwai, Hisashi Data Brief Genetics, Genomics and Molecular Biology Colletotrichum sansevieriae is an ascomycete fungus causing anthracnose disease on plants in the genus Sansevieria. Here, we report the draft genome sequence of isolate Sa-1–2 of this fungus. The genome size is >51 Mb, and the assembly consists of 8647 contigs and contains 13,664 predicted protein-coding genes. Pathogenicity factors such as plant cell wall-degrading enzymes and effector proteins were also predicted. Additionally, the phylogenetic relationship of isolates from different Colletotrichum spp. was analyzed, revealing that the isolate belongs to a novel major clade consisting of species that infect succulent plants originating from Africa. The draft genome sequence has been deposited at GenBank under accession number NJHP00000000. Elsevier 2018-03-21 /pmc/articles/PMC5996722/ /pubmed/29900221 http://dx.doi.org/10.1016/j.dib.2018.03.083 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Genetics, Genomics and Molecular Biology Nakamura, Masayuki Fujikawa, Takashi Nakamori, Daichi Iwai, Hisashi Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata |
title | Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata |
title_full | Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata |
title_fullStr | Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata |
title_full_unstemmed | Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata |
title_short | Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata |
title_sort | draft genome sequence of colletotrichum sansevieriae sa-1–2, the anthracnose pathogen of sansevieria trifasciata |
topic | Genetics, Genomics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5996722/ https://www.ncbi.nlm.nih.gov/pubmed/29900221 http://dx.doi.org/10.1016/j.dib.2018.03.083 |
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