Cargando…

Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata

Colletotrichum sansevieriae is an ascomycete fungus causing anthracnose disease on plants in the genus Sansevieria. Here, we report the draft genome sequence of isolate Sa-1–2 of this fungus. The genome size is >51 Mb, and the assembly consists of 8647 contigs and contains 13,664 predicted protei...

Descripción completa

Detalles Bibliográficos
Autores principales: Nakamura, Masayuki, Fujikawa, Takashi, Nakamori, Daichi, Iwai, Hisashi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5996722/
https://www.ncbi.nlm.nih.gov/pubmed/29900221
http://dx.doi.org/10.1016/j.dib.2018.03.083
_version_ 1783330928352821248
author Nakamura, Masayuki
Fujikawa, Takashi
Nakamori, Daichi
Iwai, Hisashi
author_facet Nakamura, Masayuki
Fujikawa, Takashi
Nakamori, Daichi
Iwai, Hisashi
author_sort Nakamura, Masayuki
collection PubMed
description Colletotrichum sansevieriae is an ascomycete fungus causing anthracnose disease on plants in the genus Sansevieria. Here, we report the draft genome sequence of isolate Sa-1–2 of this fungus. The genome size is >51 Mb, and the assembly consists of 8647 contigs and contains 13,664 predicted protein-coding genes. Pathogenicity factors such as plant cell wall-degrading enzymes and effector proteins were also predicted. Additionally, the phylogenetic relationship of isolates from different Colletotrichum spp. was analyzed, revealing that the isolate belongs to a novel major clade consisting of species that infect succulent plants originating from Africa. The draft genome sequence has been deposited at GenBank under accession number NJHP00000000.
format Online
Article
Text
id pubmed-5996722
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-59967222018-06-13 Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata Nakamura, Masayuki Fujikawa, Takashi Nakamori, Daichi Iwai, Hisashi Data Brief Genetics, Genomics and Molecular Biology    Colletotrichum sansevieriae is an ascomycete fungus causing anthracnose disease on plants in the genus Sansevieria. Here, we report the draft genome sequence of isolate Sa-1–2 of this fungus. The genome size is >51 Mb, and the assembly consists of 8647 contigs and contains 13,664 predicted protein-coding genes. Pathogenicity factors such as plant cell wall-degrading enzymes and effector proteins were also predicted. Additionally, the phylogenetic relationship of isolates from different Colletotrichum spp. was analyzed, revealing that the isolate belongs to a novel major clade consisting of species that infect succulent plants originating from Africa. The draft genome sequence has been deposited at GenBank under accession number NJHP00000000. Elsevier 2018-03-21 /pmc/articles/PMC5996722/ /pubmed/29900221 http://dx.doi.org/10.1016/j.dib.2018.03.083 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology   
Nakamura, Masayuki
Fujikawa, Takashi
Nakamori, Daichi
Iwai, Hisashi
Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata
title Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata
title_full Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata
title_fullStr Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata
title_full_unstemmed Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata
title_short Draft genome sequence of Colletotrichum sansevieriae Sa-1–2, the anthracnose pathogen of Sansevieria trifasciata
title_sort draft genome sequence of colletotrichum sansevieriae sa-1–2, the anthracnose pathogen of sansevieria trifasciata
topic Genetics, Genomics and Molecular Biology   
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5996722/
https://www.ncbi.nlm.nih.gov/pubmed/29900221
http://dx.doi.org/10.1016/j.dib.2018.03.083
work_keys_str_mv AT nakamuramasayuki draftgenomesequenceofcolletotrichumsansevieriaesa12theanthracnosepathogenofsansevieriatrifasciata
AT fujikawatakashi draftgenomesequenceofcolletotrichumsansevieriaesa12theanthracnosepathogenofsansevieriatrifasciata
AT nakamoridaichi draftgenomesequenceofcolletotrichumsansevieriaesa12theanthracnosepathogenofsansevieriatrifasciata
AT iwaihisashi draftgenomesequenceofcolletotrichumsansevieriaesa12theanthracnosepathogenofsansevieriatrifasciata