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An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria
This data in brief article presents the data obtained during the validation of the optimized Biotyper Matrix Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) database. The validation was performed by the different expertise laboratories, collaborating within the E...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5998164/ https://www.ncbi.nlm.nih.gov/pubmed/29904651 http://dx.doi.org/10.1016/j.dib.2018.04.070 |
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author | Veloo, A.C.M. Jean-Pierre, H. Justesen, U.S. Morris, T. Urban, E. Wybo, I. Kostrzewa, M. Friedrich, A.W. on behalf of the ENRIA workgroup |
author_facet | Veloo, A.C.M. Jean-Pierre, H. Justesen, U.S. Morris, T. Urban, E. Wybo, I. Kostrzewa, M. Friedrich, A.W. on behalf of the ENRIA workgroup |
author_sort | Veloo, A.C.M. |
collection | PubMed |
description | This data in brief article presents the data obtained during the validation of the optimized Biotyper Matrix Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) database. The validation was performed by the different expertise laboratories, collaborating within the European Network for the Rapid Identification of Anaerobes (ENRIA) project, using 6309 human clinical anaerobic bacterial strains. Different databases were compared with each other; the db 5989 database (V5 database); the V5 database complimented with Main Spectral Profiles (MSPs) of ENRIA strains added to the next update of the database; and the V5 database complimented with the MSPs of all anaerobic clinical isolates collected within the ENRIA project. For a comprehensive discussion of the full dataset, please see the research article that accompanies this data article (Veloo et al., 2018) [1] |
format | Online Article Text |
id | pubmed-5998164 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-59981642018-06-14 An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria Veloo, A.C.M. Jean-Pierre, H. Justesen, U.S. Morris, T. Urban, E. Wybo, I. Kostrzewa, M. Friedrich, A.W. on behalf of the ENRIA workgroup Data Brief Immunology and Microbiology This data in brief article presents the data obtained during the validation of the optimized Biotyper Matrix Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) database. The validation was performed by the different expertise laboratories, collaborating within the European Network for the Rapid Identification of Anaerobes (ENRIA) project, using 6309 human clinical anaerobic bacterial strains. Different databases were compared with each other; the db 5989 database (V5 database); the V5 database complimented with Main Spectral Profiles (MSPs) of ENRIA strains added to the next update of the database; and the V5 database complimented with the MSPs of all anaerobic clinical isolates collected within the ENRIA project. For a comprehensive discussion of the full dataset, please see the research article that accompanies this data article (Veloo et al., 2018) [1] Elsevier 2018-04-23 /pmc/articles/PMC5998164/ /pubmed/29904651 http://dx.doi.org/10.1016/j.dib.2018.04.070 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Immunology and Microbiology Veloo, A.C.M. Jean-Pierre, H. Justesen, U.S. Morris, T. Urban, E. Wybo, I. Kostrzewa, M. Friedrich, A.W. on behalf of the ENRIA workgroup An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria |
title | An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria |
title_full | An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria |
title_fullStr | An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria |
title_full_unstemmed | An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria |
title_short | An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria |
title_sort | overview of the data obtained during the validation of an optimized maldi-tof ms biotyper database for the identification of anaerobic bacteria |
topic | Immunology and Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5998164/ https://www.ncbi.nlm.nih.gov/pubmed/29904651 http://dx.doi.org/10.1016/j.dib.2018.04.070 |
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