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An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria

This data in brief article presents the data obtained during the validation of the optimized Biotyper Matrix Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) database. The validation was performed by the different expertise laboratories, collaborating within the E...

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Autores principales: Veloo, A.C.M., Jean-Pierre, H., Justesen, U.S., Morris, T., Urban, E., Wybo, I., Kostrzewa, M., Friedrich, A.W., on behalf of the ENRIA workgroup
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5998164/
https://www.ncbi.nlm.nih.gov/pubmed/29904651
http://dx.doi.org/10.1016/j.dib.2018.04.070
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author Veloo, A.C.M.
Jean-Pierre, H.
Justesen, U.S.
Morris, T.
Urban, E.
Wybo, I.
Kostrzewa, M.
Friedrich, A.W.
on behalf of the ENRIA workgroup
author_facet Veloo, A.C.M.
Jean-Pierre, H.
Justesen, U.S.
Morris, T.
Urban, E.
Wybo, I.
Kostrzewa, M.
Friedrich, A.W.
on behalf of the ENRIA workgroup
author_sort Veloo, A.C.M.
collection PubMed
description This data in brief article presents the data obtained during the validation of the optimized Biotyper Matrix Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) database. The validation was performed by the different expertise laboratories, collaborating within the European Network for the Rapid Identification of Anaerobes (ENRIA) project, using 6309 human clinical anaerobic bacterial strains. Different databases were compared with each other; the db 5989 database (V5 database); the V5 database complimented with Main Spectral Profiles (MSPs) of ENRIA strains added to the next update of the database; and the V5 database complimented with the MSPs of all anaerobic clinical isolates collected within the ENRIA project. For a comprehensive discussion of the full dataset, please see the research article that accompanies this data article (Veloo et al., 2018) [1]
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spelling pubmed-59981642018-06-14 An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria Veloo, A.C.M. Jean-Pierre, H. Justesen, U.S. Morris, T. Urban, E. Wybo, I. Kostrzewa, M. Friedrich, A.W. on behalf of the ENRIA workgroup Data Brief Immunology and Microbiology    This data in brief article presents the data obtained during the validation of the optimized Biotyper Matrix Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) database. The validation was performed by the different expertise laboratories, collaborating within the European Network for the Rapid Identification of Anaerobes (ENRIA) project, using 6309 human clinical anaerobic bacterial strains. Different databases were compared with each other; the db 5989 database (V5 database); the V5 database complimented with Main Spectral Profiles (MSPs) of ENRIA strains added to the next update of the database; and the V5 database complimented with the MSPs of all anaerobic clinical isolates collected within the ENRIA project. For a comprehensive discussion of the full dataset, please see the research article that accompanies this data article (Veloo et al., 2018) [1] Elsevier 2018-04-23 /pmc/articles/PMC5998164/ /pubmed/29904651 http://dx.doi.org/10.1016/j.dib.2018.04.070 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Immunology and Microbiology   
Veloo, A.C.M.
Jean-Pierre, H.
Justesen, U.S.
Morris, T.
Urban, E.
Wybo, I.
Kostrzewa, M.
Friedrich, A.W.
on behalf of the ENRIA workgroup
An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria
title An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria
title_full An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria
title_fullStr An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria
title_full_unstemmed An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria
title_short An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria
title_sort overview of the data obtained during the validation of an optimized maldi-tof ms biotyper database for the identification of anaerobic bacteria
topic Immunology and Microbiology   
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5998164/
https://www.ncbi.nlm.nih.gov/pubmed/29904651
http://dx.doi.org/10.1016/j.dib.2018.04.070
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