Genome-scale DNA sequence data and the evolutionary history of placental mammals

We present a genomic data set comprised of the coding DNA sequences of 5162 loci from 90 vertebrate species, including 82 mammals. The loci were aligned with their protein sequences. The aligned protein sequences were then back translated into their original DNA sequences. The alignments were furthe...

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Detalles Bibliográficos
Autores principales: Wu, Shaoyuan, Edwards, Scott, Liu, Liang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Molecular Phylogenetics and Evolution   
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5998303/
https://www.ncbi.nlm.nih.gov/pubmed/29904704
http://dx.doi.org/10.1016/j.dib.2018.04.094
Descripción
Sumario:We present a genomic data set comprised of the coding DNA sequences of 5162 loci from 90 vertebrate species, including 82 mammals. The loci were aligned with their protein sequences. The aligned protein sequences were then back translated into their original DNA sequences. The alignments were further filtered to remove individual sequences from each alignment exhibiting long branches or other unusual features. The data is deposited in figshare (http://figshare.com/articles/cds_5162.zip/6031190) and will be useful as a test data set for large-scale phylogenomic analysis.

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