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Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization
Several studies have been conducted to evaluate the efficacy of statins in Korean and Asian patients. However, most previous studies only observed the percent reduction in low-density lipoprotein cholesterol (LDL-C) and did not consider the effects of various patient conditions simultaneously, such...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5999101/ https://www.ncbi.nlm.nih.gov/pubmed/29897980 http://dx.doi.org/10.1371/journal.pone.0197518 |
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author | Choi, Jingyun Kim, Yejin Kim, Hun-Sung Choi, In Young Yu, Hwanjo |
author_facet | Choi, Jingyun Kim, Yejin Kim, Hun-Sung Choi, In Young Yu, Hwanjo |
author_sort | Choi, Jingyun |
collection | PubMed |
description | Several studies have been conducted to evaluate the efficacy of statins in Korean and Asian patients. However, most previous studies only observed the percent reduction in low-density lipoprotein cholesterol (LDL-C) and did not consider the effects of various patient conditions simultaneously, such as abnormal test results, patient demographics, and prescribed drugs before taking a statin. Moreover, the characteristics of the patients whose percent reduction in LDL-C was higher than expected were not provided. Therefore, in this study, we aimed to derive meaningful phenotypes by using tensor factorization to observe the characteristics of the patients whose percent reduction in LDL-C was higher than expected among patients taking moderate-intensity statins. In addition, we used the derived phenotypes to predict how much the LDL-C levels of new patients decreased. We consequently identified eight phenotypes that represented the characteristics of the patients whose percent reduction in LDL-C was higher than expected. Moreover, the latent representations of the derived phenotypes achieved prediction performance similar to that obtained using the raw data. These results demonstrate that the derived phenotypes and latent representations are useful tools for observing the characteristics of patients and predicting LDL-C levels. Additionally, our findings provide direction on how to conduct clinical studies in the future. |
format | Online Article Text |
id | pubmed-5999101 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-59991012018-06-21 Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization Choi, Jingyun Kim, Yejin Kim, Hun-Sung Choi, In Young Yu, Hwanjo PLoS One Research Article Several studies have been conducted to evaluate the efficacy of statins in Korean and Asian patients. However, most previous studies only observed the percent reduction in low-density lipoprotein cholesterol (LDL-C) and did not consider the effects of various patient conditions simultaneously, such as abnormal test results, patient demographics, and prescribed drugs before taking a statin. Moreover, the characteristics of the patients whose percent reduction in LDL-C was higher than expected were not provided. Therefore, in this study, we aimed to derive meaningful phenotypes by using tensor factorization to observe the characteristics of the patients whose percent reduction in LDL-C was higher than expected among patients taking moderate-intensity statins. In addition, we used the derived phenotypes to predict how much the LDL-C levels of new patients decreased. We consequently identified eight phenotypes that represented the characteristics of the patients whose percent reduction in LDL-C was higher than expected. Moreover, the latent representations of the derived phenotypes achieved prediction performance similar to that obtained using the raw data. These results demonstrate that the derived phenotypes and latent representations are useful tools for observing the characteristics of patients and predicting LDL-C levels. Additionally, our findings provide direction on how to conduct clinical studies in the future. Public Library of Science 2018-06-13 /pmc/articles/PMC5999101/ /pubmed/29897980 http://dx.doi.org/10.1371/journal.pone.0197518 Text en © 2018 Choi et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Choi, Jingyun Kim, Yejin Kim, Hun-Sung Choi, In Young Yu, Hwanjo Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization |
title | Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization |
title_full | Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization |
title_fullStr | Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization |
title_full_unstemmed | Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization |
title_short | Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization |
title_sort | phenotyping of korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5999101/ https://www.ncbi.nlm.nih.gov/pubmed/29897980 http://dx.doi.org/10.1371/journal.pone.0197518 |
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