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Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization

Several studies have been conducted to evaluate the efficacy of statins in Korean and Asian patients. However, most previous studies only observed the percent reduction in low-density lipoprotein cholesterol (LDL-C) and did not consider the effects of various patient conditions simultaneously, such...

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Autores principales: Choi, Jingyun, Kim, Yejin, Kim, Hun-Sung, Choi, In Young, Yu, Hwanjo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5999101/
https://www.ncbi.nlm.nih.gov/pubmed/29897980
http://dx.doi.org/10.1371/journal.pone.0197518
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author Choi, Jingyun
Kim, Yejin
Kim, Hun-Sung
Choi, In Young
Yu, Hwanjo
author_facet Choi, Jingyun
Kim, Yejin
Kim, Hun-Sung
Choi, In Young
Yu, Hwanjo
author_sort Choi, Jingyun
collection PubMed
description Several studies have been conducted to evaluate the efficacy of statins in Korean and Asian patients. However, most previous studies only observed the percent reduction in low-density lipoprotein cholesterol (LDL-C) and did not consider the effects of various patient conditions simultaneously, such as abnormal test results, patient demographics, and prescribed drugs before taking a statin. Moreover, the characteristics of the patients whose percent reduction in LDL-C was higher than expected were not provided. Therefore, in this study, we aimed to derive meaningful phenotypes by using tensor factorization to observe the characteristics of the patients whose percent reduction in LDL-C was higher than expected among patients taking moderate-intensity statins. In addition, we used the derived phenotypes to predict how much the LDL-C levels of new patients decreased. We consequently identified eight phenotypes that represented the characteristics of the patients whose percent reduction in LDL-C was higher than expected. Moreover, the latent representations of the derived phenotypes achieved prediction performance similar to that obtained using the raw data. These results demonstrate that the derived phenotypes and latent representations are useful tools for observing the characteristics of patients and predicting LDL-C levels. Additionally, our findings provide direction on how to conduct clinical studies in the future.
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spelling pubmed-59991012018-06-21 Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization Choi, Jingyun Kim, Yejin Kim, Hun-Sung Choi, In Young Yu, Hwanjo PLoS One Research Article Several studies have been conducted to evaluate the efficacy of statins in Korean and Asian patients. However, most previous studies only observed the percent reduction in low-density lipoprotein cholesterol (LDL-C) and did not consider the effects of various patient conditions simultaneously, such as abnormal test results, patient demographics, and prescribed drugs before taking a statin. Moreover, the characteristics of the patients whose percent reduction in LDL-C was higher than expected were not provided. Therefore, in this study, we aimed to derive meaningful phenotypes by using tensor factorization to observe the characteristics of the patients whose percent reduction in LDL-C was higher than expected among patients taking moderate-intensity statins. In addition, we used the derived phenotypes to predict how much the LDL-C levels of new patients decreased. We consequently identified eight phenotypes that represented the characteristics of the patients whose percent reduction in LDL-C was higher than expected. Moreover, the latent representations of the derived phenotypes achieved prediction performance similar to that obtained using the raw data. These results demonstrate that the derived phenotypes and latent representations are useful tools for observing the characteristics of patients and predicting LDL-C levels. Additionally, our findings provide direction on how to conduct clinical studies in the future. Public Library of Science 2018-06-13 /pmc/articles/PMC5999101/ /pubmed/29897980 http://dx.doi.org/10.1371/journal.pone.0197518 Text en © 2018 Choi et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Choi, Jingyun
Kim, Yejin
Kim, Hun-Sung
Choi, In Young
Yu, Hwanjo
Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization
title Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization
title_full Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization
title_fullStr Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization
title_full_unstemmed Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization
title_short Phenotyping of Korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization
title_sort phenotyping of korean patients with better-than-expected efficacy of moderate-intensity statins using tensor factorization
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5999101/
https://www.ncbi.nlm.nih.gov/pubmed/29897980
http://dx.doi.org/10.1371/journal.pone.0197518
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