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Improving chemical shift encoding‐based water–fat separation based on a detailed consideration of magnetic field contributions

PURPOSE: To improve the robustness of existing chemical shift encoding‐based water–fat separation methods by incorporating a priori information of the magnetic field distortions in complex‐based water–fat separation. METHODS: Four major field contributions are considered: inhomogeneities of the scan...

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Autores principales: Diefenbach, Maximilian N., Ruschke, Stefan, Eggers, Holger, Meineke, Jakob, Rummeny, Ernst J., Karampinos, Dimitrios C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6001469/
https://www.ncbi.nlm.nih.gov/pubmed/29424458
http://dx.doi.org/10.1002/mrm.27097
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author Diefenbach, Maximilian N.
Ruschke, Stefan
Eggers, Holger
Meineke, Jakob
Rummeny, Ernst J.
Karampinos, Dimitrios C.
author_facet Diefenbach, Maximilian N.
Ruschke, Stefan
Eggers, Holger
Meineke, Jakob
Rummeny, Ernst J.
Karampinos, Dimitrios C.
author_sort Diefenbach, Maximilian N.
collection PubMed
description PURPOSE: To improve the robustness of existing chemical shift encoding‐based water–fat separation methods by incorporating a priori information of the magnetic field distortions in complex‐based water–fat separation. METHODS: Four major field contributions are considered: inhomogeneities of the scanner magnet, the shim field, an object‐based field map estimate, and a residual field. The former two are completely determined by spherical harmonic expansion coefficients directly available from the magnetic resonance (MR) scanner. The object‐based field map is forward simulated from air–tissue interfaces inside the field of view (FOV). The missing residual field originates from the object outside the FOV and is investigated by magnetic field simulations on a numerical whole body phantom. In vivo the spatially linear first‐order component of the residual field is estimated by measuring echo misalignments after demodulation of other field contributions resulting in a linear residual field. Gradient echo datasets of the cervical and the ankle region without and with shimming were acquired, where all four contributions were incorporated in the water–fat separation with two algorithms from the ISMRM water–fat toolbox and compared to water–fat separation with less incorporated field contributions. RESULTS: Incorporating all four field contributions as demodulation steps resulted in reduced temporal and spatial phase wraps leading to almost swap‐free water–fat separation results in all datasets. CONCLUSION: Demodulating estimates of major field contributions reduces the phase evolution to be driven by only small differences in local tissue susceptibility, which supports the field smoothness assumption of existing water–fat separation techniques.
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spelling pubmed-60014692018-06-21 Improving chemical shift encoding‐based water–fat separation based on a detailed consideration of magnetic field contributions Diefenbach, Maximilian N. Ruschke, Stefan Eggers, Holger Meineke, Jakob Rummeny, Ernst J. Karampinos, Dimitrios C. Magn Reson Med Full Papers—Imaging Methodology PURPOSE: To improve the robustness of existing chemical shift encoding‐based water–fat separation methods by incorporating a priori information of the magnetic field distortions in complex‐based water–fat separation. METHODS: Four major field contributions are considered: inhomogeneities of the scanner magnet, the shim field, an object‐based field map estimate, and a residual field. The former two are completely determined by spherical harmonic expansion coefficients directly available from the magnetic resonance (MR) scanner. The object‐based field map is forward simulated from air–tissue interfaces inside the field of view (FOV). The missing residual field originates from the object outside the FOV and is investigated by magnetic field simulations on a numerical whole body phantom. In vivo the spatially linear first‐order component of the residual field is estimated by measuring echo misalignments after demodulation of other field contributions resulting in a linear residual field. Gradient echo datasets of the cervical and the ankle region without and with shimming were acquired, where all four contributions were incorporated in the water–fat separation with two algorithms from the ISMRM water–fat toolbox and compared to water–fat separation with less incorporated field contributions. RESULTS: Incorporating all four field contributions as demodulation steps resulted in reduced temporal and spatial phase wraps leading to almost swap‐free water–fat separation results in all datasets. CONCLUSION: Demodulating estimates of major field contributions reduces the phase evolution to be driven by only small differences in local tissue susceptibility, which supports the field smoothness assumption of existing water–fat separation techniques. John Wiley and Sons Inc. 2018-02-09 2018-09 /pmc/articles/PMC6001469/ /pubmed/29424458 http://dx.doi.org/10.1002/mrm.27097 Text en © 2018 The Authors Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Full Papers—Imaging Methodology
Diefenbach, Maximilian N.
Ruschke, Stefan
Eggers, Holger
Meineke, Jakob
Rummeny, Ernst J.
Karampinos, Dimitrios C.
Improving chemical shift encoding‐based water–fat separation based on a detailed consideration of magnetic field contributions
title Improving chemical shift encoding‐based water–fat separation based on a detailed consideration of magnetic field contributions
title_full Improving chemical shift encoding‐based water–fat separation based on a detailed consideration of magnetic field contributions
title_fullStr Improving chemical shift encoding‐based water–fat separation based on a detailed consideration of magnetic field contributions
title_full_unstemmed Improving chemical shift encoding‐based water–fat separation based on a detailed consideration of magnetic field contributions
title_short Improving chemical shift encoding‐based water–fat separation based on a detailed consideration of magnetic field contributions
title_sort improving chemical shift encoding‐based water–fat separation based on a detailed consideration of magnetic field contributions
topic Full Papers—Imaging Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6001469/
https://www.ncbi.nlm.nih.gov/pubmed/29424458
http://dx.doi.org/10.1002/mrm.27097
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