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A primer on stable parameter estimation and forecasting in epidemiology by a problem-oriented regularized least squares algorithm

Public health officials are increasingly recognizing the need to develop disease-forecasting systems to respond to epidemic and pandemic outbreaks. For instance, simple epidemic models relying on a small number of parameters can play an important role in characterizing epidemic growth and generating...

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Detalles Bibliográficos
Autores principales: Smirnova, Alexandra, Chowell, Gerardo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: KeAi Publishing 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6002070/
https://www.ncbi.nlm.nih.gov/pubmed/29928741
http://dx.doi.org/10.1016/j.idm.2017.05.004
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author Smirnova, Alexandra
Chowell, Gerardo
author_facet Smirnova, Alexandra
Chowell, Gerardo
author_sort Smirnova, Alexandra
collection PubMed
description Public health officials are increasingly recognizing the need to develop disease-forecasting systems to respond to epidemic and pandemic outbreaks. For instance, simple epidemic models relying on a small number of parameters can play an important role in characterizing epidemic growth and generating short-term epidemic forecasts. In the absence of reliable information about transmission mechanisms of emerging infectious diseases, phenomenological models are useful to characterize epidemic growth patterns without the need to explicitly model transmission mechanisms and the natural history of the disease. In this article, our goal is to discuss and illustrate the role of regularization methods for estimating parameters and generating disease forecasts using the generalized Richards model in the context of the 2014–15 Ebola epidemic in West Africa.
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spelling pubmed-60020702018-06-20 A primer on stable parameter estimation and forecasting in epidemiology by a problem-oriented regularized least squares algorithm Smirnova, Alexandra Chowell, Gerardo Infect Dis Model Article Public health officials are increasingly recognizing the need to develop disease-forecasting systems to respond to epidemic and pandemic outbreaks. For instance, simple epidemic models relying on a small number of parameters can play an important role in characterizing epidemic growth and generating short-term epidemic forecasts. In the absence of reliable information about transmission mechanisms of emerging infectious diseases, phenomenological models are useful to characterize epidemic growth patterns without the need to explicitly model transmission mechanisms and the natural history of the disease. In this article, our goal is to discuss and illustrate the role of regularization methods for estimating parameters and generating disease forecasts using the generalized Richards model in the context of the 2014–15 Ebola epidemic in West Africa. KeAi Publishing 2017-05-25 /pmc/articles/PMC6002070/ /pubmed/29928741 http://dx.doi.org/10.1016/j.idm.2017.05.004 Text en © 2017 KeAi Communications Co., Ltd. Production and hosting by Elsevier B.V. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Smirnova, Alexandra
Chowell, Gerardo
A primer on stable parameter estimation and forecasting in epidemiology by a problem-oriented regularized least squares algorithm
title A primer on stable parameter estimation and forecasting in epidemiology by a problem-oriented regularized least squares algorithm
title_full A primer on stable parameter estimation and forecasting in epidemiology by a problem-oriented regularized least squares algorithm
title_fullStr A primer on stable parameter estimation and forecasting in epidemiology by a problem-oriented regularized least squares algorithm
title_full_unstemmed A primer on stable parameter estimation and forecasting in epidemiology by a problem-oriented regularized least squares algorithm
title_short A primer on stable parameter estimation and forecasting in epidemiology by a problem-oriented regularized least squares algorithm
title_sort primer on stable parameter estimation and forecasting in epidemiology by a problem-oriented regularized least squares algorithm
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6002070/
https://www.ncbi.nlm.nih.gov/pubmed/29928741
http://dx.doi.org/10.1016/j.idm.2017.05.004
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