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The crystal structures of 3-O-benzyl-1,2-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-α-d-glucofuranose and its azide displacement product
The effect of different leaving groups on the substitution versus elimination outcomes with C-5 d-glucose derivatives was investigated. The stereochemical configurations of 3-O-benzyl-1,2-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-α-d-glucofuranose, C(36)H(38)O(8)S (3) [systemat...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6002814/ https://www.ncbi.nlm.nih.gov/pubmed/29951246 http://dx.doi.org/10.1107/S205698901800765X |
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author | Clarke, Zane Barnes, Evan Prichard, Kate L. Mares, Laura J. Clegg, Jack K. McCluskey, Adam Houston, Todd A. Simone, Michela I. |
author_facet | Clarke, Zane Barnes, Evan Prichard, Kate L. Mares, Laura J. Clegg, Jack K. McCluskey, Adam Houston, Todd A. Simone, Michela I. |
author_sort | Clarke, Zane |
collection | PubMed |
description | The effect of different leaving groups on the substitution versus elimination outcomes with C-5 d-glucose derivatives was investigated. The stereochemical configurations of 3-O-benzyl-1,2-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-α-d-glucofuranose, C(36)H(38)O(8)S (3) [systematic name: 1-[(3aR,5R,6S,6aR)-6-benzyloxy-2,2-dimethyltetrahydrofuro[2,3-d][1,3]dioxol-5-yl)-2-(trityloxy)ethyl methanesulfonate], a stable intermediate, and 5-azido-3-O-benzyl-5-deoxy-1,2-O-isopropylidene-6-O-triphenylmethyl-β-l-idofuranose, C(35)H(35)N(3)O(5) (4) [systematic name: (3aR,5S,6S,6aR)-5-[1-azido-2-(trityloxy)ethyl]-6-benzyloxy-2,2-dimethyltetrahydrofuro[2,3-d][1,3]dioxole], a substitution product, were examined and the inversion of configuration for the azido group on C-5 in 4 was confirmed. The absolute structures of the molecules in the crystals of both compounds were confirmed by resonant scattering. In the crystal of 3, neighbouring molecules are linked by C—H⋯O hydrogen bonds, forming chains along the b-axis direction. The chains are linked by C—H⋯π interactions, forming layers parallel to the ab plane. In the crystal of 4, molecules are also linked by C—H⋯O hydrogen bonds, forming this time helices along the a-axis direction. The helices are linked by a number of C—H⋯π interactions, forming a supramolecular framework. |
format | Online Article Text |
id | pubmed-6002814 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-60028142018-06-27 The crystal structures of 3-O-benzyl-1,2-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-α-d-glucofuranose and its azide displacement product Clarke, Zane Barnes, Evan Prichard, Kate L. Mares, Laura J. Clegg, Jack K. McCluskey, Adam Houston, Todd A. Simone, Michela I. Acta Crystallogr E Crystallogr Commun Research Communications The effect of different leaving groups on the substitution versus elimination outcomes with C-5 d-glucose derivatives was investigated. The stereochemical configurations of 3-O-benzyl-1,2-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-α-d-glucofuranose, C(36)H(38)O(8)S (3) [systematic name: 1-[(3aR,5R,6S,6aR)-6-benzyloxy-2,2-dimethyltetrahydrofuro[2,3-d][1,3]dioxol-5-yl)-2-(trityloxy)ethyl methanesulfonate], a stable intermediate, and 5-azido-3-O-benzyl-5-deoxy-1,2-O-isopropylidene-6-O-triphenylmethyl-β-l-idofuranose, C(35)H(35)N(3)O(5) (4) [systematic name: (3aR,5S,6S,6aR)-5-[1-azido-2-(trityloxy)ethyl]-6-benzyloxy-2,2-dimethyltetrahydrofuro[2,3-d][1,3]dioxole], a substitution product, were examined and the inversion of configuration for the azido group on C-5 in 4 was confirmed. The absolute structures of the molecules in the crystals of both compounds were confirmed by resonant scattering. In the crystal of 3, neighbouring molecules are linked by C—H⋯O hydrogen bonds, forming chains along the b-axis direction. The chains are linked by C—H⋯π interactions, forming layers parallel to the ab plane. In the crystal of 4, molecules are also linked by C—H⋯O hydrogen bonds, forming this time helices along the a-axis direction. The helices are linked by a number of C—H⋯π interactions, forming a supramolecular framework. International Union of Crystallography 2018-05-31 /pmc/articles/PMC6002814/ /pubmed/29951246 http://dx.doi.org/10.1107/S205698901800765X Text en © Clarke et al. 2018 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/ |
spellingShingle | Research Communications Clarke, Zane Barnes, Evan Prichard, Kate L. Mares, Laura J. Clegg, Jack K. McCluskey, Adam Houston, Todd A. Simone, Michela I. The crystal structures of 3-O-benzyl-1,2-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-α-d-glucofuranose and its azide displacement product |
title | The crystal structures of 3-O-benzyl-1,2-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-α-d-glucofuranose and its azide displacement product |
title_full | The crystal structures of 3-O-benzyl-1,2-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-α-d-glucofuranose and its azide displacement product |
title_fullStr | The crystal structures of 3-O-benzyl-1,2-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-α-d-glucofuranose and its azide displacement product |
title_full_unstemmed | The crystal structures of 3-O-benzyl-1,2-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-α-d-glucofuranose and its azide displacement product |
title_short | The crystal structures of 3-O-benzyl-1,2-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-α-d-glucofuranose and its azide displacement product |
title_sort | crystal structures of 3-o-benzyl-1,2-o-isopropylidene-5-o-methanesulfonyl-6-o-triphenylmethyl-α-d-glucofuranose and its azide displacement product |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6002814/ https://www.ncbi.nlm.nih.gov/pubmed/29951246 http://dx.doi.org/10.1107/S205698901800765X |
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