ShinyR-DAM: a program analyzing Drosophila activity, sleep and circadian rhythms

We developed a web application ShinyR-DAM for analyzing Drosophila locomotor activity, sleep and circadian rhythms recorded by the Drosophila Activity Monitor (DAM) system (TriKinetics, Waltham, MA). Comparing with the existing programs for DAM data analysis, ShinyR-DAM greatly decreases the complex...

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Detalles Bibliográficos
Autores principales: Cichewicz, Karol, Hirsh, Jay
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6002956/
https://www.ncbi.nlm.nih.gov/pubmed/29911688
http://dx.doi.org/10.1038/s42003-018-0031-9
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author Cichewicz, Karol
Hirsh, Jay
author_facet Cichewicz, Karol
Hirsh, Jay
author_sort Cichewicz, Karol
collection PubMed
description We developed a web application ShinyR-DAM for analyzing Drosophila locomotor activity, sleep and circadian rhythms recorded by the Drosophila Activity Monitor (DAM) system (TriKinetics, Waltham, MA). Comparing with the existing programs for DAM data analysis, ShinyR-DAM greatly decreases the complexity and time required to analyze the data, producing informative and customizable plots, summary tables, and data files for statistical analysis. Our program has an intuitive graphical user interface that enables novice users to quickly perform complex analyses.
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spelling pubmed-60029562018-06-15 ShinyR-DAM: a program analyzing Drosophila activity, sleep and circadian rhythms Cichewicz, Karol Hirsh, Jay Commun Biol Article We developed a web application ShinyR-DAM for analyzing Drosophila locomotor activity, sleep and circadian rhythms recorded by the Drosophila Activity Monitor (DAM) system (TriKinetics, Waltham, MA). Comparing with the existing programs for DAM data analysis, ShinyR-DAM greatly decreases the complexity and time required to analyze the data, producing informative and customizable plots, summary tables, and data files for statistical analysis. Our program has an intuitive graphical user interface that enables novice users to quickly perform complex analyses. Nature Publishing Group UK 2018-04-05 /pmc/articles/PMC6002956/ /pubmed/29911688 http://dx.doi.org/10.1038/s42003-018-0031-9 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Cichewicz, Karol
Hirsh, Jay
ShinyR-DAM: a program analyzing Drosophila activity, sleep and circadian rhythms
title ShinyR-DAM: a program analyzing Drosophila activity, sleep and circadian rhythms
title_full ShinyR-DAM: a program analyzing Drosophila activity, sleep and circadian rhythms
title_fullStr ShinyR-DAM: a program analyzing Drosophila activity, sleep and circadian rhythms
title_full_unstemmed ShinyR-DAM: a program analyzing Drosophila activity, sleep and circadian rhythms
title_short ShinyR-DAM: a program analyzing Drosophila activity, sleep and circadian rhythms
title_sort shinyr-dam: a program analyzing drosophila activity, sleep and circadian rhythms
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6002956/
https://www.ncbi.nlm.nih.gov/pubmed/29911688
http://dx.doi.org/10.1038/s42003-018-0031-9
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