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Molecular dynamics simulations of liquid silica crystallization

Silica is one of the most abundant minerals on Earth and is widely used in many fields. Investigating the crystallization of liquid silica by atomic simulations is of great importance to understand the crystallization mechanism; however, the high crystallization barrier and the tendency of silica to...

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Autores principales: Niu, Haiyang, Piaggi, Pablo M., Invernizzi, Michele, Parrinello, Michele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: National Academy of Sciences 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6003482/
https://www.ncbi.nlm.nih.gov/pubmed/29735667
http://dx.doi.org/10.1073/pnas.1803919115
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author Niu, Haiyang
Piaggi, Pablo M.
Invernizzi, Michele
Parrinello, Michele
author_facet Niu, Haiyang
Piaggi, Pablo M.
Invernizzi, Michele
Parrinello, Michele
author_sort Niu, Haiyang
collection PubMed
description Silica is one of the most abundant minerals on Earth and is widely used in many fields. Investigating the crystallization of liquid silica by atomic simulations is of great importance to understand the crystallization mechanism; however, the high crystallization barrier and the tendency of silica to form glasses make such simulations very challenging. Here we have studied liquid silica crystallization to [Formula: see text]-cristobalite with metadynamics, using X-ray diffraction (XRD) peak intensities as collective variables. The frequent transitions between solid and liquid of the biased runs demonstrate the highly successful use of the XRD peak intensities as collective variables, which leads to the convergence of the free-energy surface. By calculating the difference in free energy, we have estimated the melting temperature of [Formula: see text]-cristobalite, which is in good agreement with the literature. The nucleation mechanism during the crystallization of liquid silica can be described by classical nucleation theory.
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spelling pubmed-60034822018-06-18 Molecular dynamics simulations of liquid silica crystallization Niu, Haiyang Piaggi, Pablo M. Invernizzi, Michele Parrinello, Michele Proc Natl Acad Sci U S A Physical Sciences Silica is one of the most abundant minerals on Earth and is widely used in many fields. Investigating the crystallization of liquid silica by atomic simulations is of great importance to understand the crystallization mechanism; however, the high crystallization barrier and the tendency of silica to form glasses make such simulations very challenging. Here we have studied liquid silica crystallization to [Formula: see text]-cristobalite with metadynamics, using X-ray diffraction (XRD) peak intensities as collective variables. The frequent transitions between solid and liquid of the biased runs demonstrate the highly successful use of the XRD peak intensities as collective variables, which leads to the convergence of the free-energy surface. By calculating the difference in free energy, we have estimated the melting temperature of [Formula: see text]-cristobalite, which is in good agreement with the literature. The nucleation mechanism during the crystallization of liquid silica can be described by classical nucleation theory. National Academy of Sciences 2018-05-22 2018-05-07 /pmc/articles/PMC6003482/ /pubmed/29735667 http://dx.doi.org/10.1073/pnas.1803919115 Text en Copyright © 2018 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/ This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Physical Sciences
Niu, Haiyang
Piaggi, Pablo M.
Invernizzi, Michele
Parrinello, Michele
Molecular dynamics simulations of liquid silica crystallization
title Molecular dynamics simulations of liquid silica crystallization
title_full Molecular dynamics simulations of liquid silica crystallization
title_fullStr Molecular dynamics simulations of liquid silica crystallization
title_full_unstemmed Molecular dynamics simulations of liquid silica crystallization
title_short Molecular dynamics simulations of liquid silica crystallization
title_sort molecular dynamics simulations of liquid silica crystallization
topic Physical Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6003482/
https://www.ncbi.nlm.nih.gov/pubmed/29735667
http://dx.doi.org/10.1073/pnas.1803919115
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AT invernizzimichele moleculardynamicssimulationsofliquidsilicacrystallization
AT parrinellomichele moleculardynamicssimulationsofliquidsilicacrystallization