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Genetic differentiation, local adaptation and phenotypic plasticity in fragmented populations of a rare forest herb
BACKGROUND: Due to habitat loss and fragmentation, numerous forest species are subject to severe population decline. Investigating variation in genetic diversity, phenotypic plasticity and local adaptation should be a prerequisite for implementing conservation actions. This study aimed to explore th...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6004105/ https://www.ncbi.nlm.nih.gov/pubmed/29915689 http://dx.doi.org/10.7717/peerj.4929 |
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author | Gentili, Rodolfo Solari, Aldo Diekmann, Martin Duprè, Cecilia Monti, Gianna Serafina Armiraglio, Stefano Assini, Silvia Citterio, Sandra |
author_facet | Gentili, Rodolfo Solari, Aldo Diekmann, Martin Duprè, Cecilia Monti, Gianna Serafina Armiraglio, Stefano Assini, Silvia Citterio, Sandra |
author_sort | Gentili, Rodolfo |
collection | PubMed |
description | BACKGROUND: Due to habitat loss and fragmentation, numerous forest species are subject to severe population decline. Investigating variation in genetic diversity, phenotypic plasticity and local adaptation should be a prerequisite for implementing conservation actions. This study aimed to explore these aspects in ten fragmented populations of Physospermum cornubiense in view of translocation measures across its Italian range. METHODS: For each population we collected environmental data on landscape (habitat size, quality and fragmentation) and local conditions (slope, presence of alien species, incidence of the herbivorous insect Metcalfa pruinosa and soil parameters). We measured vegetative and reproductive traits in the field and analysed the genetic population structure using ISSR markers (STRUCTURE and AMOVA). We then estimated the neutral (F(ST)) and quantitative (P(ST)) genetic differentiation of populations. RESULTS: The populations exhibited moderate phenotypic variation. Population size (range: 16–655 individuals), number of flowering adults (range: 3–420 individuals) and inflorescence size (range: 5.0–8.4 cm) were positively related to Mg soil content. Populations’ gene diversity was moderate (Nei-H = 0.071–0.1316); STRUCTURE analysis identified five different clusters and three main geographic groups: upper, lower, and Apennine/Western Po plain. Fragmentation did not have an influence on the local adaptation of populations, which for all measured traits showed P(ST) < F(ST), indicating convergent selection. DISCUSSION: The variation of phenotypic traits across sites was attributed to plastic response rather than local adaptation. Plant translocation from suitable source populations to endangered ones should particularly take into account provenance according to identified genetic clusters and specific soil factors. |
format | Online Article Text |
id | pubmed-6004105 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-60041052018-06-18 Genetic differentiation, local adaptation and phenotypic plasticity in fragmented populations of a rare forest herb Gentili, Rodolfo Solari, Aldo Diekmann, Martin Duprè, Cecilia Monti, Gianna Serafina Armiraglio, Stefano Assini, Silvia Citterio, Sandra PeerJ Biodiversity BACKGROUND: Due to habitat loss and fragmentation, numerous forest species are subject to severe population decline. Investigating variation in genetic diversity, phenotypic plasticity and local adaptation should be a prerequisite for implementing conservation actions. This study aimed to explore these aspects in ten fragmented populations of Physospermum cornubiense in view of translocation measures across its Italian range. METHODS: For each population we collected environmental data on landscape (habitat size, quality and fragmentation) and local conditions (slope, presence of alien species, incidence of the herbivorous insect Metcalfa pruinosa and soil parameters). We measured vegetative and reproductive traits in the field and analysed the genetic population structure using ISSR markers (STRUCTURE and AMOVA). We then estimated the neutral (F(ST)) and quantitative (P(ST)) genetic differentiation of populations. RESULTS: The populations exhibited moderate phenotypic variation. Population size (range: 16–655 individuals), number of flowering adults (range: 3–420 individuals) and inflorescence size (range: 5.0–8.4 cm) were positively related to Mg soil content. Populations’ gene diversity was moderate (Nei-H = 0.071–0.1316); STRUCTURE analysis identified five different clusters and three main geographic groups: upper, lower, and Apennine/Western Po plain. Fragmentation did not have an influence on the local adaptation of populations, which for all measured traits showed P(ST) < F(ST), indicating convergent selection. DISCUSSION: The variation of phenotypic traits across sites was attributed to plastic response rather than local adaptation. Plant translocation from suitable source populations to endangered ones should particularly take into account provenance according to identified genetic clusters and specific soil factors. PeerJ Inc. 2018-06-13 /pmc/articles/PMC6004105/ /pubmed/29915689 http://dx.doi.org/10.7717/peerj.4929 Text en ©2018 Gentili et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Biodiversity Gentili, Rodolfo Solari, Aldo Diekmann, Martin Duprè, Cecilia Monti, Gianna Serafina Armiraglio, Stefano Assini, Silvia Citterio, Sandra Genetic differentiation, local adaptation and phenotypic plasticity in fragmented populations of a rare forest herb |
title | Genetic differentiation, local adaptation and phenotypic plasticity in fragmented populations of a rare forest herb |
title_full | Genetic differentiation, local adaptation and phenotypic plasticity in fragmented populations of a rare forest herb |
title_fullStr | Genetic differentiation, local adaptation and phenotypic plasticity in fragmented populations of a rare forest herb |
title_full_unstemmed | Genetic differentiation, local adaptation and phenotypic plasticity in fragmented populations of a rare forest herb |
title_short | Genetic differentiation, local adaptation and phenotypic plasticity in fragmented populations of a rare forest herb |
title_sort | genetic differentiation, local adaptation and phenotypic plasticity in fragmented populations of a rare forest herb |
topic | Biodiversity |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6004105/ https://www.ncbi.nlm.nih.gov/pubmed/29915689 http://dx.doi.org/10.7717/peerj.4929 |
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