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Feature extraction method for proteins based on Markov tripeptide by compressive sensing

BACKGROUND: In order to capture the vital structural information of the original protein, the symbol sequence was transformed into the Markov frequency matrix according to the consecutive three residues throughout the chain. A three-dimensional sparse matrix sized 20 × 20 × 20 was obtained and expan...

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Detalles Bibliográficos
Autores principales: Gao, C. F., Wu, X. Y.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6006778/
https://www.ncbi.nlm.nih.gov/pubmed/29914376
http://dx.doi.org/10.1186/s12859-018-2235-x