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Identification and Phylogenetic Analysis of Basic Helix-Loop-Helix Genes in the Diamondback Moth
Basic helix-loop-helix (bHLH) transcription factors play essential roles in regulating eukaryotic developmental and physiological processes such as neuron generation, myocyte formation, intestinal tissue development, and response to environmental stress. In this study, the diamondback moth, Plutella...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6007555/ https://www.ncbi.nlm.nih.gov/pubmed/29901738 http://dx.doi.org/10.1093/jisesa/iey057 |
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author | Zeng, Zhen Wang, Yong Johnson, Nana Adwoa Nkuma Wang, Guang-Dong Yao, Qin Chen, Ke-Ping |
author_facet | Zeng, Zhen Wang, Yong Johnson, Nana Adwoa Nkuma Wang, Guang-Dong Yao, Qin Chen, Ke-Ping |
author_sort | Zeng, Zhen |
collection | PubMed |
description | Basic helix-loop-helix (bHLH) transcription factors play essential roles in regulating eukaryotic developmental and physiological processes such as neuron generation, myocyte formation, intestinal tissue development, and response to environmental stress. In this study, the diamondback moth, Plutella xylostella (L.) (Lepidoptera: Plutellidae), genome was found to encode 52 bHLH genes. All 52 P. xylostella bHLH (PxbHLH) genes were classified into correspondent bHLH families according to their orthology with bHLHs from fruit fly and other insect species. Among these 52 PxbHLH genes, 19 have been annotated consistently with our classification in GenBank database. The remaining 33 PxbHLH genes are either annotated as general bHLH genes or as hypothetical genes. Therefore, our data provide useful information for updating annotations to PxbHLH genes. P. xylostella has four stem cell leukemia (SCL) genes (one of them has three copies), two Dys genes, two copies of MyoR, Mitf, and Sima genes, and three copies of Sage genes. Further studies may be conducted to elucidate functions of these specific bHLH genes in regulating P. xylostella growth and development. |
format | Online Article Text |
id | pubmed-6007555 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-60075552018-07-05 Identification and Phylogenetic Analysis of Basic Helix-Loop-Helix Genes in the Diamondback Moth Zeng, Zhen Wang, Yong Johnson, Nana Adwoa Nkuma Wang, Guang-Dong Yao, Qin Chen, Ke-Ping J Insect Sci Research Article Basic helix-loop-helix (bHLH) transcription factors play essential roles in regulating eukaryotic developmental and physiological processes such as neuron generation, myocyte formation, intestinal tissue development, and response to environmental stress. In this study, the diamondback moth, Plutella xylostella (L.) (Lepidoptera: Plutellidae), genome was found to encode 52 bHLH genes. All 52 P. xylostella bHLH (PxbHLH) genes were classified into correspondent bHLH families according to their orthology with bHLHs from fruit fly and other insect species. Among these 52 PxbHLH genes, 19 have been annotated consistently with our classification in GenBank database. The remaining 33 PxbHLH genes are either annotated as general bHLH genes or as hypothetical genes. Therefore, our data provide useful information for updating annotations to PxbHLH genes. P. xylostella has four stem cell leukemia (SCL) genes (one of them has three copies), two Dys genes, two copies of MyoR, Mitf, and Sima genes, and three copies of Sage genes. Further studies may be conducted to elucidate functions of these specific bHLH genes in regulating P. xylostella growth and development. Oxford University Press 2018-06-12 /pmc/articles/PMC6007555/ /pubmed/29901738 http://dx.doi.org/10.1093/jisesa/iey057 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Entomological Society of America. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Research Article Zeng, Zhen Wang, Yong Johnson, Nana Adwoa Nkuma Wang, Guang-Dong Yao, Qin Chen, Ke-Ping Identification and Phylogenetic Analysis of Basic Helix-Loop-Helix Genes in the Diamondback Moth |
title | Identification and Phylogenetic Analysis of Basic Helix-Loop-Helix Genes in the Diamondback Moth |
title_full | Identification and Phylogenetic Analysis of Basic Helix-Loop-Helix Genes in the Diamondback Moth |
title_fullStr | Identification and Phylogenetic Analysis of Basic Helix-Loop-Helix Genes in the Diamondback Moth |
title_full_unstemmed | Identification and Phylogenetic Analysis of Basic Helix-Loop-Helix Genes in the Diamondback Moth |
title_short | Identification and Phylogenetic Analysis of Basic Helix-Loop-Helix Genes in the Diamondback Moth |
title_sort | identification and phylogenetic analysis of basic helix-loop-helix genes in the diamondback moth |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6007555/ https://www.ncbi.nlm.nih.gov/pubmed/29901738 http://dx.doi.org/10.1093/jisesa/iey057 |
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