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Genetic polymorphisms in ataxin-3 and liver cirrhosis risk related to aflatoxin B1
BACKGROUND: Altered expression of ataxin-3 (AT3) can modify DNA repair capacity and is observed in human diseases. The genetic polymorphisms of this gene in aflatoxin B1 (AFB1)–related liver cirrhosis (LC) have not yet been elucidated. MATERIALS AND METHODS: We conducted a hospital-based case–contro...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6007954/ https://www.ncbi.nlm.nih.gov/pubmed/29937988 http://dx.doi.org/10.18632/oncotarget.24535 |
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author | Wang, Xing-Zhizi Huang, Xiao-Ying Yao, Jin-Guang Wang, Chao Xia, Qiang Long, Xi-Dai |
author_facet | Wang, Xing-Zhizi Huang, Xiao-Ying Yao, Jin-Guang Wang, Chao Xia, Qiang Long, Xi-Dai |
author_sort | Wang, Xing-Zhizi |
collection | PubMed |
description | BACKGROUND: Altered expression of ataxin-3 (AT3) can modify DNA repair capacity and is observed in human diseases. The genetic polymorphisms of this gene in aflatoxin B1 (AFB1)–related liver cirrhosis (LC) have not yet been elucidated. MATERIALS AND METHODS: We conducted a hospital-based case–control study, including 384 patients with LC and 851 controls without any liver diseases, to assess the association between 264 polymorphisms in AT3 and AFB1-related LC risk. Genotype were tested using TaqMan-PCR or sequencing technique. RESULTS: We found three differentially distributed SNPs (rs8021276, rs7158733, and rs10146249) via the screening analysis; however, only rs8021276 polymorphism was further identified to modify the risk of LC. Compared with the homozygote of rs8021276 A alleles (rs8021276-AA), the genotypes of rs8021276 G alleles (rs8021276-AG or -GG) increased LC risk (OR: 2.48 and 6.98; 95% CI: 1.84–3.33 and 4.35–11.22, respectively). Significant interactive effects between risk genotypes and AFB1 exposure status were also observed in the joint effects analysis. Additionally, rs8021276 polymorphism was also associated with down-regulation of AT3 mRNA expression and increasing AFB1-DNA adducts in liver tissues with cirrhosis. CONCLUSIONS: These results suggest AT3 polymorphisms may be risk biomarkers of AFB1-related LC, and rs8021276 is a potential candidate. |
format | Online Article Text |
id | pubmed-6007954 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-60079542018-06-22 Genetic polymorphisms in ataxin-3 and liver cirrhosis risk related to aflatoxin B1 Wang, Xing-Zhizi Huang, Xiao-Ying Yao, Jin-Guang Wang, Chao Xia, Qiang Long, Xi-Dai Oncotarget Research Paper: Gerotarget (Focus on Aging) BACKGROUND: Altered expression of ataxin-3 (AT3) can modify DNA repair capacity and is observed in human diseases. The genetic polymorphisms of this gene in aflatoxin B1 (AFB1)–related liver cirrhosis (LC) have not yet been elucidated. MATERIALS AND METHODS: We conducted a hospital-based case–control study, including 384 patients with LC and 851 controls without any liver diseases, to assess the association between 264 polymorphisms in AT3 and AFB1-related LC risk. Genotype were tested using TaqMan-PCR or sequencing technique. RESULTS: We found three differentially distributed SNPs (rs8021276, rs7158733, and rs10146249) via the screening analysis; however, only rs8021276 polymorphism was further identified to modify the risk of LC. Compared with the homozygote of rs8021276 A alleles (rs8021276-AA), the genotypes of rs8021276 G alleles (rs8021276-AG or -GG) increased LC risk (OR: 2.48 and 6.98; 95% CI: 1.84–3.33 and 4.35–11.22, respectively). Significant interactive effects between risk genotypes and AFB1 exposure status were also observed in the joint effects analysis. Additionally, rs8021276 polymorphism was also associated with down-regulation of AT3 mRNA expression and increasing AFB1-DNA adducts in liver tissues with cirrhosis. CONCLUSIONS: These results suggest AT3 polymorphisms may be risk biomarkers of AFB1-related LC, and rs8021276 is a potential candidate. Impact Journals LLC 2018-02-19 /pmc/articles/PMC6007954/ /pubmed/29937988 http://dx.doi.org/10.18632/oncotarget.24535 Text en Copyright: © 2018 Wang et al. http://creativecommons.org/licenses/by/3.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) (CC-BY), which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Research Paper: Gerotarget (Focus on Aging) Wang, Xing-Zhizi Huang, Xiao-Ying Yao, Jin-Guang Wang, Chao Xia, Qiang Long, Xi-Dai Genetic polymorphisms in ataxin-3 and liver cirrhosis risk related to aflatoxin B1 |
title | Genetic polymorphisms in ataxin-3 and liver cirrhosis risk related to aflatoxin B1 |
title_full | Genetic polymorphisms in ataxin-3 and liver cirrhosis risk related to aflatoxin B1 |
title_fullStr | Genetic polymorphisms in ataxin-3 and liver cirrhosis risk related to aflatoxin B1 |
title_full_unstemmed | Genetic polymorphisms in ataxin-3 and liver cirrhosis risk related to aflatoxin B1 |
title_short | Genetic polymorphisms in ataxin-3 and liver cirrhosis risk related to aflatoxin B1 |
title_sort | genetic polymorphisms in ataxin-3 and liver cirrhosis risk related to aflatoxin b1 |
topic | Research Paper: Gerotarget (Focus on Aging) |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6007954/ https://www.ncbi.nlm.nih.gov/pubmed/29937988 http://dx.doi.org/10.18632/oncotarget.24535 |
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