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Out-of-equilibrium microcompartments for the bottom-up integration of metabolic functions

Self-sustained metabolic pathways in microcompartments are the corner-stone for living systems. From a technological viewpoint, such pathways are a mandatory prerequisite for the reliable design of artificial cells functioning out-of-equilibrium. Here we develop a microfluidic platform for the minia...

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Autores principales: Beneyton, Thomas, Krafft, Dorothee, Bednarz, Claudia, Kleineberg, Christin, Woelfer, Christian, Ivanov, Ivan, Vidaković-Koch, Tanja, Sundmacher, Kai, Baret, Jean-Christophe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6008305/
https://www.ncbi.nlm.nih.gov/pubmed/29921909
http://dx.doi.org/10.1038/s41467-018-04825-1
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author Beneyton, Thomas
Krafft, Dorothee
Bednarz, Claudia
Kleineberg, Christin
Woelfer, Christian
Ivanov, Ivan
Vidaković-Koch, Tanja
Sundmacher, Kai
Baret, Jean-Christophe
author_facet Beneyton, Thomas
Krafft, Dorothee
Bednarz, Claudia
Kleineberg, Christin
Woelfer, Christian
Ivanov, Ivan
Vidaković-Koch, Tanja
Sundmacher, Kai
Baret, Jean-Christophe
author_sort Beneyton, Thomas
collection PubMed
description Self-sustained metabolic pathways in microcompartments are the corner-stone for living systems. From a technological viewpoint, such pathways are a mandatory prerequisite for the reliable design of artificial cells functioning out-of-equilibrium. Here we develop a microfluidic platform for the miniaturization and analysis of metabolic pathways in man-made microcompartments formed of water-in-oil droplets. In a modular approach, we integrate in the microcompartments a nicotinamide adenine dinucleotide (NAD)-dependent enzymatic reaction and a NAD-regeneration module as a minimal metabolism. We show that the microcompartments sustain a metabolically active state until the substrate is fully consumed. Reversibly, the external addition of the substrate reboots the metabolic activity of the microcompartments back to an active state. We therefore control the metabolic state of thousands of independent monodisperse microcompartments, a step of relevance for the construction of large populations of metabolically active artificial cells.
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spelling pubmed-60083052018-06-21 Out-of-equilibrium microcompartments for the bottom-up integration of metabolic functions Beneyton, Thomas Krafft, Dorothee Bednarz, Claudia Kleineberg, Christin Woelfer, Christian Ivanov, Ivan Vidaković-Koch, Tanja Sundmacher, Kai Baret, Jean-Christophe Nat Commun Article Self-sustained metabolic pathways in microcompartments are the corner-stone for living systems. From a technological viewpoint, such pathways are a mandatory prerequisite for the reliable design of artificial cells functioning out-of-equilibrium. Here we develop a microfluidic platform for the miniaturization and analysis of metabolic pathways in man-made microcompartments formed of water-in-oil droplets. In a modular approach, we integrate in the microcompartments a nicotinamide adenine dinucleotide (NAD)-dependent enzymatic reaction and a NAD-regeneration module as a minimal metabolism. We show that the microcompartments sustain a metabolically active state until the substrate is fully consumed. Reversibly, the external addition of the substrate reboots the metabolic activity of the microcompartments back to an active state. We therefore control the metabolic state of thousands of independent monodisperse microcompartments, a step of relevance for the construction of large populations of metabolically active artificial cells. Nature Publishing Group UK 2018-06-19 /pmc/articles/PMC6008305/ /pubmed/29921909 http://dx.doi.org/10.1038/s41467-018-04825-1 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Beneyton, Thomas
Krafft, Dorothee
Bednarz, Claudia
Kleineberg, Christin
Woelfer, Christian
Ivanov, Ivan
Vidaković-Koch, Tanja
Sundmacher, Kai
Baret, Jean-Christophe
Out-of-equilibrium microcompartments for the bottom-up integration of metabolic functions
title Out-of-equilibrium microcompartments for the bottom-up integration of metabolic functions
title_full Out-of-equilibrium microcompartments for the bottom-up integration of metabolic functions
title_fullStr Out-of-equilibrium microcompartments for the bottom-up integration of metabolic functions
title_full_unstemmed Out-of-equilibrium microcompartments for the bottom-up integration of metabolic functions
title_short Out-of-equilibrium microcompartments for the bottom-up integration of metabolic functions
title_sort out-of-equilibrium microcompartments for the bottom-up integration of metabolic functions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6008305/
https://www.ncbi.nlm.nih.gov/pubmed/29921909
http://dx.doi.org/10.1038/s41467-018-04825-1
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