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Homogeneous Time Constants Promote Oscillations in Negative Feedback Loops

[Image: see text] Biological oscillators are present in nearly all self-regulating systems, from individual cells to entire organisms. In any oscillator structure, a negative feedback loop is necessary, but not sufficient to guarantee the emergence of periodic behaviors. The likelihood of oscillatio...

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Autores principales: Blanchini, Franco, Cuba Samaniego, Christian, Franco, Elisa, Giordano, Giulia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2018
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6008730/
https://www.ncbi.nlm.nih.gov/pubmed/29676894
http://dx.doi.org/10.1021/acssynbio.7b00442
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author Blanchini, Franco
Cuba Samaniego, Christian
Franco, Elisa
Giordano, Giulia
author_facet Blanchini, Franco
Cuba Samaniego, Christian
Franco, Elisa
Giordano, Giulia
author_sort Blanchini, Franco
collection PubMed
description [Image: see text] Biological oscillators are present in nearly all self-regulating systems, from individual cells to entire organisms. In any oscillator structure, a negative feedback loop is necessary, but not sufficient to guarantee the emergence of periodic behaviors. The likelihood of oscillations can be improved by careful tuning of the system time constants and by increasing the loop gain, yet it is unclear whether there is any general relationship between optimal time constants and loop gain. This issue is particularly relevant in genetic oscillators resulting from a chain of different subsequent biochemical events, each with distinct (and uncertain) kinetics. Using two families of genetic oscillators as model examples, we show that the loop gain required for oscillations is minimum when all elements in the loop have the same time constant. On the contrary, we show that homeostasis is ensured if a single element is considerably slower than the others.
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spelling pubmed-60087302018-06-21 Homogeneous Time Constants Promote Oscillations in Negative Feedback Loops Blanchini, Franco Cuba Samaniego, Christian Franco, Elisa Giordano, Giulia ACS Synth Biol [Image: see text] Biological oscillators are present in nearly all self-regulating systems, from individual cells to entire organisms. In any oscillator structure, a negative feedback loop is necessary, but not sufficient to guarantee the emergence of periodic behaviors. The likelihood of oscillations can be improved by careful tuning of the system time constants and by increasing the loop gain, yet it is unclear whether there is any general relationship between optimal time constants and loop gain. This issue is particularly relevant in genetic oscillators resulting from a chain of different subsequent biochemical events, each with distinct (and uncertain) kinetics. Using two families of genetic oscillators as model examples, we show that the loop gain required for oscillations is minimum when all elements in the loop have the same time constant. On the contrary, we show that homeostasis is ensured if a single element is considerably slower than the others. American Chemical Society 2018-04-20 2018-06-15 /pmc/articles/PMC6008730/ /pubmed/29676894 http://dx.doi.org/10.1021/acssynbio.7b00442 Text en Copyright © 2018 American Chemical Society This is an open access article published under a Creative Commons Non-Commercial No Derivative Works (CC-BY-NC-ND) Attribution License (http://pubs.acs.org/page/policy/authorchoice_ccbyncnd_termsofuse.html) , which permits copying and redistribution of the article, and creation of adaptations, all for non-commercial purposes.
spellingShingle Blanchini, Franco
Cuba Samaniego, Christian
Franco, Elisa
Giordano, Giulia
Homogeneous Time Constants Promote Oscillations in Negative Feedback Loops
title Homogeneous Time Constants Promote Oscillations in Negative Feedback Loops
title_full Homogeneous Time Constants Promote Oscillations in Negative Feedback Loops
title_fullStr Homogeneous Time Constants Promote Oscillations in Negative Feedback Loops
title_full_unstemmed Homogeneous Time Constants Promote Oscillations in Negative Feedback Loops
title_short Homogeneous Time Constants Promote Oscillations in Negative Feedback Loops
title_sort homogeneous time constants promote oscillations in negative feedback loops
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6008730/
https://www.ncbi.nlm.nih.gov/pubmed/29676894
http://dx.doi.org/10.1021/acssynbio.7b00442
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