Cargando…
riboSeed: leveraging prokaryotic genomic architecture to assemble across ribosomal regions
The vast majority of bacterial genome sequencing has been performed using Illumina short reads. Because of the inherent difficulty of resolving repeated regions with short reads alone, only ∼10% of sequencing projects have resulted in a closed genome. The most common repeated regions are those codin...
Autores principales: | Waters, Nicholas R, Abram, Florence, Brennan, Fiona, Holmes, Ashleigh, Pritchard, Leighton |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6009695/ https://www.ncbi.nlm.nih.gov/pubmed/29608703 http://dx.doi.org/10.1093/nar/gky212 |
Ejemplares similares
-
Easy phylotyping of Escherichia coli via the EzClermont web app and command-line tool
por: Waters, Nicholas R., et al.
Publicado: (2020) -
DeepRibo: a neural network for precise gene annotation of prokaryotes by combining ribosome profiling signal and binding site patterns
por: Clauwaert, Jim, et al.
Publicado: (2019) -
RiboVIEW: a computational framework for visualization, quality control and statistical analysis of ribosome profiling data
por: Legrand, Carine, et al.
Publicado: (2020) -
RiboAbacus: a model trained on polyribosome images predicts ribosome density and translational efficiency from mammalian transcriptomes
por: Lauria, Fabio, et al.
Publicado: (2015) -
Illumina-based RiboMethSeq approach for mapping of 2′-O-Me residues in RNA
por: Marchand, Virginie, et al.
Publicado: (2016)