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The remarkable plethora of infestation-responsive Q-type C2H2 transcription factors in potato
OBJECTIVE: Q-type C2H2 transcription factors (TF) play crucial roles in the plant response to stress, often leading to regulation of downstream genes required for tolerance to these challenges. An infestation-responsive Q-type C2H2 TF (StZFP2) is induced by wounding and infestation in potato. While...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6011193/ https://www.ncbi.nlm.nih.gov/pubmed/29921330 http://dx.doi.org/10.1186/s13104-018-3503-6 |
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author | Lawrence, Susan D. Novak, Nicole G. |
author_facet | Lawrence, Susan D. Novak, Nicole G. |
author_sort | Lawrence, Susan D. |
collection | PubMed |
description | OBJECTIVE: Q-type C2H2 transcription factors (TF) play crucial roles in the plant response to stress, often leading to regulation of downstream genes required for tolerance to these challenges. An infestation-responsive Q-type C2H2 TF (StZFP2) is induced by wounding and infestation in potato. While mining the Solanum tuberosum Group Phureja genome for additional members of this family of proteins, five StZFP2-like genes were found on a portion of chromosome 11. The objective of this work was to differentiate these genes in tissue specificity and expression upon infestation. RESULTS: Examination of different tissues showed that young roots had the highest amounts of transcripts for five of the genes. Expression of their transcripts upon excision or infestation by Manduca sexta, showed that all six genes were induced. Overall, each gene showed variations in its response to infestation and specificity for tissue expression. The six genes encode very similar proteins but most likely play unique roles in the plant response to infestation. In contrast, only two homologs have been identified in Arabidopsis and tomato. Overexpression of similar genes has led to enhanced tolerance to, for example, salinity, drought and pathogen stress. Discovery of these new StZFP2 homologs could provide additional resources for potato breeders. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13104-018-3503-6) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6011193 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-60111932018-06-27 The remarkable plethora of infestation-responsive Q-type C2H2 transcription factors in potato Lawrence, Susan D. Novak, Nicole G. BMC Res Notes Research Note OBJECTIVE: Q-type C2H2 transcription factors (TF) play crucial roles in the plant response to stress, often leading to regulation of downstream genes required for tolerance to these challenges. An infestation-responsive Q-type C2H2 TF (StZFP2) is induced by wounding and infestation in potato. While mining the Solanum tuberosum Group Phureja genome for additional members of this family of proteins, five StZFP2-like genes were found on a portion of chromosome 11. The objective of this work was to differentiate these genes in tissue specificity and expression upon infestation. RESULTS: Examination of different tissues showed that young roots had the highest amounts of transcripts for five of the genes. Expression of their transcripts upon excision or infestation by Manduca sexta, showed that all six genes were induced. Overall, each gene showed variations in its response to infestation and specificity for tissue expression. The six genes encode very similar proteins but most likely play unique roles in the plant response to infestation. In contrast, only two homologs have been identified in Arabidopsis and tomato. Overexpression of similar genes has led to enhanced tolerance to, for example, salinity, drought and pathogen stress. Discovery of these new StZFP2 homologs could provide additional resources for potato breeders. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s13104-018-3503-6) contains supplementary material, which is available to authorized users. BioMed Central 2018-06-19 /pmc/articles/PMC6011193/ /pubmed/29921330 http://dx.doi.org/10.1186/s13104-018-3503-6 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Note Lawrence, Susan D. Novak, Nicole G. The remarkable plethora of infestation-responsive Q-type C2H2 transcription factors in potato |
title | The remarkable plethora of infestation-responsive Q-type C2H2 transcription factors in potato |
title_full | The remarkable plethora of infestation-responsive Q-type C2H2 transcription factors in potato |
title_fullStr | The remarkable plethora of infestation-responsive Q-type C2H2 transcription factors in potato |
title_full_unstemmed | The remarkable plethora of infestation-responsive Q-type C2H2 transcription factors in potato |
title_short | The remarkable plethora of infestation-responsive Q-type C2H2 transcription factors in potato |
title_sort | remarkable plethora of infestation-responsive q-type c2h2 transcription factors in potato |
topic | Research Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6011193/ https://www.ncbi.nlm.nih.gov/pubmed/29921330 http://dx.doi.org/10.1186/s13104-018-3503-6 |
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