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X-ray-induced sample damage at the Mn L-edge: a case study for soft X-ray spectroscopy of transition metal complexes in solution
X-ray induced sample damage can impede electronic and structural investigations of radiation-sensitive samples studied with X-rays. Here we quantify dose-dependent sample damage to the prototypical Mn(III)(acac)(3) complex in solution and at room temperature for the soft X-ray range, using X-ray abs...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royal Society of Chemistry
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6011208/ https://www.ncbi.nlm.nih.gov/pubmed/29888772 http://dx.doi.org/10.1039/c8cp03094d |
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author | Kubin, Markus Kern, Jan Guo, Meiyuan Källman, Erik Mitzner, Rolf Yachandra, Vittal K. Lundberg, Marcus Yano, Junko Wernet, Philippe |
author_facet | Kubin, Markus Kern, Jan Guo, Meiyuan Källman, Erik Mitzner, Rolf Yachandra, Vittal K. Lundberg, Marcus Yano, Junko Wernet, Philippe |
author_sort | Kubin, Markus |
collection | PubMed |
description | X-ray induced sample damage can impede electronic and structural investigations of radiation-sensitive samples studied with X-rays. Here we quantify dose-dependent sample damage to the prototypical Mn(III)(acac)(3) complex in solution and at room temperature for the soft X-ray range, using X-ray absorption spectroscopy at the Mn L-edge. We observe the appearance of a reduced Mn(II) species as the X-ray dose is increased. We find a half-damage dose of 1.6 MGy and quantify a spectroscopically tolerable dose on the order of 0.3 MGy (1 Gy = 1 J kg(–1)), where 90% of Mn(III)(acac)(3) are intact. Our dose-limit is around one order of magnitude lower than the Henderson limit (half-damage dose of 20 MGy) which is commonly employed for protein crystallography with hard X-rays. It is comparable, however, to the dose-limits obtained for collecting un-damaged Mn K-edge spectra of the photosystem II protein, using hard X-rays. The dose-dependent reduction of Mn(III) observed here for solution samples occurs at a dose limit that is two to four orders of magnitude smaller than the dose limits previously reported for soft X-ray spectroscopy of iron samples in the solid phase. We compare our measured to calculated spectra from ab initio restricted active space (RAS) theory and discuss possible mechanisms for the observed dose-dependent damage of Mn(III)(acac)(3) in solution. On the basis of our results, we assess the influence of sample damage in other experimental studies with soft X-rays from storage-ring synchrotron radiation sources and X-ray free-electron lasers. |
format | Online Article Text |
id | pubmed-6011208 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-60112082018-07-29 X-ray-induced sample damage at the Mn L-edge: a case study for soft X-ray spectroscopy of transition metal complexes in solution Kubin, Markus Kern, Jan Guo, Meiyuan Källman, Erik Mitzner, Rolf Yachandra, Vittal K. Lundberg, Marcus Yano, Junko Wernet, Philippe Phys Chem Chem Phys Chemistry X-ray induced sample damage can impede electronic and structural investigations of radiation-sensitive samples studied with X-rays. Here we quantify dose-dependent sample damage to the prototypical Mn(III)(acac)(3) complex in solution and at room temperature for the soft X-ray range, using X-ray absorption spectroscopy at the Mn L-edge. We observe the appearance of a reduced Mn(II) species as the X-ray dose is increased. We find a half-damage dose of 1.6 MGy and quantify a spectroscopically tolerable dose on the order of 0.3 MGy (1 Gy = 1 J kg(–1)), where 90% of Mn(III)(acac)(3) are intact. Our dose-limit is around one order of magnitude lower than the Henderson limit (half-damage dose of 20 MGy) which is commonly employed for protein crystallography with hard X-rays. It is comparable, however, to the dose-limits obtained for collecting un-damaged Mn K-edge spectra of the photosystem II protein, using hard X-rays. The dose-dependent reduction of Mn(III) observed here for solution samples occurs at a dose limit that is two to four orders of magnitude smaller than the dose limits previously reported for soft X-ray spectroscopy of iron samples in the solid phase. We compare our measured to calculated spectra from ab initio restricted active space (RAS) theory and discuss possible mechanisms for the observed dose-dependent damage of Mn(III)(acac)(3) in solution. On the basis of our results, we assess the influence of sample damage in other experimental studies with soft X-rays from storage-ring synchrotron radiation sources and X-ray free-electron lasers. Royal Society of Chemistry 2018-06-28 2018-06-04 /pmc/articles/PMC6011208/ /pubmed/29888772 http://dx.doi.org/10.1039/c8cp03094d Text en This journal is © The Royal Society of Chemistry 2018 http://creativecommons.org/licenses/by-nc/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported Licence (CC BY-NC 3.0) |
spellingShingle | Chemistry Kubin, Markus Kern, Jan Guo, Meiyuan Källman, Erik Mitzner, Rolf Yachandra, Vittal K. Lundberg, Marcus Yano, Junko Wernet, Philippe X-ray-induced sample damage at the Mn L-edge: a case study for soft X-ray spectroscopy of transition metal complexes in solution |
title | X-ray-induced sample damage at the Mn L-edge: a case study for soft X-ray spectroscopy of transition metal complexes in solution
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title_full | X-ray-induced sample damage at the Mn L-edge: a case study for soft X-ray spectroscopy of transition metal complexes in solution
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title_fullStr | X-ray-induced sample damage at the Mn L-edge: a case study for soft X-ray spectroscopy of transition metal complexes in solution
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title_full_unstemmed | X-ray-induced sample damage at the Mn L-edge: a case study for soft X-ray spectroscopy of transition metal complexes in solution
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title_short | X-ray-induced sample damage at the Mn L-edge: a case study for soft X-ray spectroscopy of transition metal complexes in solution
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title_sort | x-ray-induced sample damage at the mn l-edge: a case study for soft x-ray spectroscopy of transition metal complexes in solution |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6011208/ https://www.ncbi.nlm.nih.gov/pubmed/29888772 http://dx.doi.org/10.1039/c8cp03094d |
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