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Influence of infectious disease seasonality on the performance of the outbreak detection algorithm in the China Infectious Disease Automated-alert and Response System

OBJECTIVE: The Chinese Center for Disease Control and Prevention developed the China Infectious Disease Automated-alert and Response System (CIDARS) in 2008. The CIDARS can detect outbreak signals in a timely manner but generates many false-positive signals, especially for diseases with seasonality....

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Autores principales: Wang, Ruiping, Jiang, Yonggen, Guo, Xiaoqin, Wu, Yiling, Zhao, Genming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6011277/
https://www.ncbi.nlm.nih.gov/pubmed/28728470
http://dx.doi.org/10.1177/0300060517718770
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author Wang, Ruiping
Jiang, Yonggen
Guo, Xiaoqin
Wu, Yiling
Zhao, Genming
author_facet Wang, Ruiping
Jiang, Yonggen
Guo, Xiaoqin
Wu, Yiling
Zhao, Genming
author_sort Wang, Ruiping
collection PubMed
description OBJECTIVE: The Chinese Center for Disease Control and Prevention developed the China Infectious Disease Automated-alert and Response System (CIDARS) in 2008. The CIDARS can detect outbreak signals in a timely manner but generates many false-positive signals, especially for diseases with seasonality. We assessed the influence of seasonality on infectious disease outbreak detection performance. METHODS: Chickenpox surveillance data in Songjiang District, Shanghai were used. The optimized early alert thresholds for chickenpox were selected according to three algorithm evaluation indexes: sensitivity (Se), false alarm rate (FAR), and time to detection (TTD). Performance of selected proper thresholds was assessed by data external to the study period. RESULTS: The optimized early alert threshold for chickenpox during the epidemic season was the percentile P65, which demonstrated an Se of 93.33%, FAR of 0%, and TTD of 0 days. The optimized early alert threshold in the nonepidemic season was P50, demonstrating an Se of 100%, FAR of 18.94%, and TTD was 2.5 days. The performance evaluation demonstrated that the use of an optimized threshold adjusted for seasonality could reduce the FAR and shorten the TTD. CONCLUSIONS: Selection of optimized early alert thresholds based on local infectious disease seasonality could improve the performance of the CIDARS.
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spelling pubmed-60112772018-06-25 Influence of infectious disease seasonality on the performance of the outbreak detection algorithm in the China Infectious Disease Automated-alert and Response System Wang, Ruiping Jiang, Yonggen Guo, Xiaoqin Wu, Yiling Zhao, Genming J Int Med Res Research Report OBJECTIVE: The Chinese Center for Disease Control and Prevention developed the China Infectious Disease Automated-alert and Response System (CIDARS) in 2008. The CIDARS can detect outbreak signals in a timely manner but generates many false-positive signals, especially for diseases with seasonality. We assessed the influence of seasonality on infectious disease outbreak detection performance. METHODS: Chickenpox surveillance data in Songjiang District, Shanghai were used. The optimized early alert thresholds for chickenpox were selected according to three algorithm evaluation indexes: sensitivity (Se), false alarm rate (FAR), and time to detection (TTD). Performance of selected proper thresholds was assessed by data external to the study period. RESULTS: The optimized early alert threshold for chickenpox during the epidemic season was the percentile P65, which demonstrated an Se of 93.33%, FAR of 0%, and TTD of 0 days. The optimized early alert threshold in the nonepidemic season was P50, demonstrating an Se of 100%, FAR of 18.94%, and TTD was 2.5 days. The performance evaluation demonstrated that the use of an optimized threshold adjusted for seasonality could reduce the FAR and shorten the TTD. CONCLUSIONS: Selection of optimized early alert thresholds based on local infectious disease seasonality could improve the performance of the CIDARS. SAGE Publications 2017-07-21 2018-01 /pmc/articles/PMC6011277/ /pubmed/28728470 http://dx.doi.org/10.1177/0300060517718770 Text en © The Author(s) 2017 http://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Research Report
Wang, Ruiping
Jiang, Yonggen
Guo, Xiaoqin
Wu, Yiling
Zhao, Genming
Influence of infectious disease seasonality on the performance of the outbreak detection algorithm in the China Infectious Disease Automated-alert and Response System
title Influence of infectious disease seasonality on the performance of the outbreak detection algorithm in the China Infectious Disease Automated-alert and Response System
title_full Influence of infectious disease seasonality on the performance of the outbreak detection algorithm in the China Infectious Disease Automated-alert and Response System
title_fullStr Influence of infectious disease seasonality on the performance of the outbreak detection algorithm in the China Infectious Disease Automated-alert and Response System
title_full_unstemmed Influence of infectious disease seasonality on the performance of the outbreak detection algorithm in the China Infectious Disease Automated-alert and Response System
title_short Influence of infectious disease seasonality on the performance of the outbreak detection algorithm in the China Infectious Disease Automated-alert and Response System
title_sort influence of infectious disease seasonality on the performance of the outbreak detection algorithm in the china infectious disease automated-alert and response system
topic Research Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6011277/
https://www.ncbi.nlm.nih.gov/pubmed/28728470
http://dx.doi.org/10.1177/0300060517718770
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