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Rare structural variants in the DOCK8 gene identified in a cohort of 439 patients with neurodevelopmental disorders

Detection of copy number variations (CNVs) is a first-tier clinical diagnostic test for children with neurodevelopmental disorders (NDD), which reveals the genetic cause of the disorder in more than 20%. These are mostly known microdeletion/microduplication syndromes, but variants of unknown clinica...

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Autores principales: Krgovic, Danijela, Kokalj Vokac, Nadja, Zagorac, Andreja, Gregoric Kumperscak, Hojka
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6013431/
https://www.ncbi.nlm.nih.gov/pubmed/29930340
http://dx.doi.org/10.1038/s41598-018-27824-0
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author Krgovic, Danijela
Kokalj Vokac, Nadja
Zagorac, Andreja
Gregoric Kumperscak, Hojka
author_facet Krgovic, Danijela
Kokalj Vokac, Nadja
Zagorac, Andreja
Gregoric Kumperscak, Hojka
author_sort Krgovic, Danijela
collection PubMed
description Detection of copy number variations (CNVs) is a first-tier clinical diagnostic test for children with neurodevelopmental disorders (NDD), which reveals the genetic cause of the disorder in more than 20%. These are mostly known microdeletion/microduplication syndromes, but variants of unknown clinical significance (VOUS) and ambiguous CNVs can also be detected. An example of the last two are abnormalities in the DOCK8 gene. Conflicting interpretations of CNVs affecting DOCK8 can be found in the literature. Deletions were predicted to have a impact in carriers with variable clinical manifestations, where duplications have been proposed as benign variants. In our study, CNV screening was performed in a cohort involving 439 probands with suspected NDD. We identified known microdeletion/microduplication syndromes in 19% and VOUS CNVs in 8% of patients. Among these, three patients had a CNV encompassing the DOCK8 gene. Although diverse clinical presentations are noted in our three patients, comparison of their phenotypes revealed that abnormalities in cognition and communication, aggressive behaviour and mood swings are common to all of them. Therefore, a clinical relevance, in terms of influencing the psychiatric clinical picture of patients, is proposed for the CNVs disrupting the DOCK8 gene, regardless of whether it is a deletion or duplication.
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spelling pubmed-60134312018-06-27 Rare structural variants in the DOCK8 gene identified in a cohort of 439 patients with neurodevelopmental disorders Krgovic, Danijela Kokalj Vokac, Nadja Zagorac, Andreja Gregoric Kumperscak, Hojka Sci Rep Article Detection of copy number variations (CNVs) is a first-tier clinical diagnostic test for children with neurodevelopmental disorders (NDD), which reveals the genetic cause of the disorder in more than 20%. These are mostly known microdeletion/microduplication syndromes, but variants of unknown clinical significance (VOUS) and ambiguous CNVs can also be detected. An example of the last two are abnormalities in the DOCK8 gene. Conflicting interpretations of CNVs affecting DOCK8 can be found in the literature. Deletions were predicted to have a impact in carriers with variable clinical manifestations, where duplications have been proposed as benign variants. In our study, CNV screening was performed in a cohort involving 439 probands with suspected NDD. We identified known microdeletion/microduplication syndromes in 19% and VOUS CNVs in 8% of patients. Among these, three patients had a CNV encompassing the DOCK8 gene. Although diverse clinical presentations are noted in our three patients, comparison of their phenotypes revealed that abnormalities in cognition and communication, aggressive behaviour and mood swings are common to all of them. Therefore, a clinical relevance, in terms of influencing the psychiatric clinical picture of patients, is proposed for the CNVs disrupting the DOCK8 gene, regardless of whether it is a deletion or duplication. Nature Publishing Group UK 2018-06-21 /pmc/articles/PMC6013431/ /pubmed/29930340 http://dx.doi.org/10.1038/s41598-018-27824-0 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Krgovic, Danijela
Kokalj Vokac, Nadja
Zagorac, Andreja
Gregoric Kumperscak, Hojka
Rare structural variants in the DOCK8 gene identified in a cohort of 439 patients with neurodevelopmental disorders
title Rare structural variants in the DOCK8 gene identified in a cohort of 439 patients with neurodevelopmental disorders
title_full Rare structural variants in the DOCK8 gene identified in a cohort of 439 patients with neurodevelopmental disorders
title_fullStr Rare structural variants in the DOCK8 gene identified in a cohort of 439 patients with neurodevelopmental disorders
title_full_unstemmed Rare structural variants in the DOCK8 gene identified in a cohort of 439 patients with neurodevelopmental disorders
title_short Rare structural variants in the DOCK8 gene identified in a cohort of 439 patients with neurodevelopmental disorders
title_sort rare structural variants in the dock8 gene identified in a cohort of 439 patients with neurodevelopmental disorders
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6013431/
https://www.ncbi.nlm.nih.gov/pubmed/29930340
http://dx.doi.org/10.1038/s41598-018-27824-0
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