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Deep-learned 3D black-blood imaging using automatic labelling technique and 3D convolutional neural networks for detecting metastatic brain tumors

Black-blood (BB) imaging is used to complement contrast-enhanced 3D gradient-echo (CE 3D-GRE) imaging for detecting brain metastases, requiring additional scan time. In this study, we proposed deep-learned 3D BB imaging with an auto-labelling technique and 3D convolutional neural networks for brain...

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Autores principales: Jun, Yohan, Eo, Taejoon, Kim, Taeseong, Shin, Hyungseob, Hwang, Dosik, Bae, So Hi, Park, Yae Won, Lee, Ho-Joon, Choi, Byoung Wook, Ahn, Sung Soo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6013490/
https://www.ncbi.nlm.nih.gov/pubmed/29930257
http://dx.doi.org/10.1038/s41598-018-27742-1
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author Jun, Yohan
Eo, Taejoon
Kim, Taeseong
Shin, Hyungseob
Hwang, Dosik
Bae, So Hi
Park, Yae Won
Lee, Ho-Joon
Choi, Byoung Wook
Ahn, Sung Soo
author_facet Jun, Yohan
Eo, Taejoon
Kim, Taeseong
Shin, Hyungseob
Hwang, Dosik
Bae, So Hi
Park, Yae Won
Lee, Ho-Joon
Choi, Byoung Wook
Ahn, Sung Soo
author_sort Jun, Yohan
collection PubMed
description Black-blood (BB) imaging is used to complement contrast-enhanced 3D gradient-echo (CE 3D-GRE) imaging for detecting brain metastases, requiring additional scan time. In this study, we proposed deep-learned 3D BB imaging with an auto-labelling technique and 3D convolutional neural networks for brain metastases detection without additional BB scan. Patients were randomly selected for training (29 sets) and testing (36 sets). Two neuroradiologists independently evaluated deep-learned and original BB images, assessing the degree of blood vessel suppression and lesion conspicuity. Vessel signals were effectively suppressed in all patients. The figure of merits, which indicate the diagnostic performance of radiologists, were 0.9708 with deep-learned BB and 0.9437 with original BB imaging, suggesting that the deep-learned BB imaging is highly comparable to the original BB imaging (difference was not significant; p = 0.2142). In per patient analysis, sensitivities were 100% for both deep-learned and original BB imaging; however, the original BB imaging indicated false positive results for two patients. In per lesion analysis, sensitivities were 90.3% for deep-learned and 100% for original BB images. There were eight false positive lesions on the original BB imaging but only one on the deep-learned BB imaging. Deep-learned 3D BB imaging can be effective for brain metastases detection.
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spelling pubmed-60134902018-06-27 Deep-learned 3D black-blood imaging using automatic labelling technique and 3D convolutional neural networks for detecting metastatic brain tumors Jun, Yohan Eo, Taejoon Kim, Taeseong Shin, Hyungseob Hwang, Dosik Bae, So Hi Park, Yae Won Lee, Ho-Joon Choi, Byoung Wook Ahn, Sung Soo Sci Rep Article Black-blood (BB) imaging is used to complement contrast-enhanced 3D gradient-echo (CE 3D-GRE) imaging for detecting brain metastases, requiring additional scan time. In this study, we proposed deep-learned 3D BB imaging with an auto-labelling technique and 3D convolutional neural networks for brain metastases detection without additional BB scan. Patients were randomly selected for training (29 sets) and testing (36 sets). Two neuroradiologists independently evaluated deep-learned and original BB images, assessing the degree of blood vessel suppression and lesion conspicuity. Vessel signals were effectively suppressed in all patients. The figure of merits, which indicate the diagnostic performance of radiologists, were 0.9708 with deep-learned BB and 0.9437 with original BB imaging, suggesting that the deep-learned BB imaging is highly comparable to the original BB imaging (difference was not significant; p = 0.2142). In per patient analysis, sensitivities were 100% for both deep-learned and original BB imaging; however, the original BB imaging indicated false positive results for two patients. In per lesion analysis, sensitivities were 90.3% for deep-learned and 100% for original BB images. There were eight false positive lesions on the original BB imaging but only one on the deep-learned BB imaging. Deep-learned 3D BB imaging can be effective for brain metastases detection. Nature Publishing Group UK 2018-06-21 /pmc/articles/PMC6013490/ /pubmed/29930257 http://dx.doi.org/10.1038/s41598-018-27742-1 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Jun, Yohan
Eo, Taejoon
Kim, Taeseong
Shin, Hyungseob
Hwang, Dosik
Bae, So Hi
Park, Yae Won
Lee, Ho-Joon
Choi, Byoung Wook
Ahn, Sung Soo
Deep-learned 3D black-blood imaging using automatic labelling technique and 3D convolutional neural networks for detecting metastatic brain tumors
title Deep-learned 3D black-blood imaging using automatic labelling technique and 3D convolutional neural networks for detecting metastatic brain tumors
title_full Deep-learned 3D black-blood imaging using automatic labelling technique and 3D convolutional neural networks for detecting metastatic brain tumors
title_fullStr Deep-learned 3D black-blood imaging using automatic labelling technique and 3D convolutional neural networks for detecting metastatic brain tumors
title_full_unstemmed Deep-learned 3D black-blood imaging using automatic labelling technique and 3D convolutional neural networks for detecting metastatic brain tumors
title_short Deep-learned 3D black-blood imaging using automatic labelling technique and 3D convolutional neural networks for detecting metastatic brain tumors
title_sort deep-learned 3d black-blood imaging using automatic labelling technique and 3d convolutional neural networks for detecting metastatic brain tumors
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6013490/
https://www.ncbi.nlm.nih.gov/pubmed/29930257
http://dx.doi.org/10.1038/s41598-018-27742-1
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