Cargando…

Draft Genome Sequence of a Highly Heterozygous Yeast Strain from the Metschnikowia pulcherrima Subclade, UCD127

Metschnikowia strain UCD127 was isolated from soil in Ireland and sequenced. It is a highly heterozygous diploid strain with 385,000 single nucleotide polymorphisms (SNPs). Its ribosomal DNA has the highest similarity to that of M. chrysoperlae, but its ACT1 and TEF1 loci and mitochondrial genome sh...

Descripción completa

Detalles Bibliográficos
Autores principales: Venkatesh, Anjan, Murray, Anthony L., Boyle, Adrian B., Quinn Farrington, Lisa, Maher, Timothy J., Ó’Gaora, Peadar, Wolfe, Kenneth H., O’Brien, Caoimhe E., Butler, Geraldine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6013633/
https://www.ncbi.nlm.nih.gov/pubmed/29930059
http://dx.doi.org/10.1128/genomeA.00550-18
_version_ 1783334056108228608
author Venkatesh, Anjan
Murray, Anthony L.
Boyle, Adrian B.
Quinn Farrington, Lisa
Maher, Timothy J.
Ó’Gaora, Peadar
Wolfe, Kenneth H.
O’Brien, Caoimhe E.
Butler, Geraldine
author_facet Venkatesh, Anjan
Murray, Anthony L.
Boyle, Adrian B.
Quinn Farrington, Lisa
Maher, Timothy J.
Ó’Gaora, Peadar
Wolfe, Kenneth H.
O’Brien, Caoimhe E.
Butler, Geraldine
author_sort Venkatesh, Anjan
collection PubMed
description Metschnikowia strain UCD127 was isolated from soil in Ireland and sequenced. It is a highly heterozygous diploid strain with 385,000 single nucleotide polymorphisms (SNPs). Its ribosomal DNA has the highest similarity to that of M. chrysoperlae, but its ACT1 and TEF1 loci and mitochondrial genome show affinity to those of M. fructicola, whose genome is significantly larger.
format Online
Article
Text
id pubmed-6013633
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-60136332018-06-29 Draft Genome Sequence of a Highly Heterozygous Yeast Strain from the Metschnikowia pulcherrima Subclade, UCD127 Venkatesh, Anjan Murray, Anthony L. Boyle, Adrian B. Quinn Farrington, Lisa Maher, Timothy J. Ó’Gaora, Peadar Wolfe, Kenneth H. O’Brien, Caoimhe E. Butler, Geraldine Genome Announc Eukaryotes Metschnikowia strain UCD127 was isolated from soil in Ireland and sequenced. It is a highly heterozygous diploid strain with 385,000 single nucleotide polymorphisms (SNPs). Its ribosomal DNA has the highest similarity to that of M. chrysoperlae, but its ACT1 and TEF1 loci and mitochondrial genome show affinity to those of M. fructicola, whose genome is significantly larger. American Society for Microbiology 2018-06-21 /pmc/articles/PMC6013633/ /pubmed/29930059 http://dx.doi.org/10.1128/genomeA.00550-18 Text en Copyright © 2018 Venkatesh et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Eukaryotes
Venkatesh, Anjan
Murray, Anthony L.
Boyle, Adrian B.
Quinn Farrington, Lisa
Maher, Timothy J.
Ó’Gaora, Peadar
Wolfe, Kenneth H.
O’Brien, Caoimhe E.
Butler, Geraldine
Draft Genome Sequence of a Highly Heterozygous Yeast Strain from the Metschnikowia pulcherrima Subclade, UCD127
title Draft Genome Sequence of a Highly Heterozygous Yeast Strain from the Metschnikowia pulcherrima Subclade, UCD127
title_full Draft Genome Sequence of a Highly Heterozygous Yeast Strain from the Metschnikowia pulcherrima Subclade, UCD127
title_fullStr Draft Genome Sequence of a Highly Heterozygous Yeast Strain from the Metschnikowia pulcherrima Subclade, UCD127
title_full_unstemmed Draft Genome Sequence of a Highly Heterozygous Yeast Strain from the Metschnikowia pulcherrima Subclade, UCD127
title_short Draft Genome Sequence of a Highly Heterozygous Yeast Strain from the Metschnikowia pulcherrima Subclade, UCD127
title_sort draft genome sequence of a highly heterozygous yeast strain from the metschnikowia pulcherrima subclade, ucd127
topic Eukaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6013633/
https://www.ncbi.nlm.nih.gov/pubmed/29930059
http://dx.doi.org/10.1128/genomeA.00550-18
work_keys_str_mv AT venkateshanjan draftgenomesequenceofahighlyheterozygousyeaststrainfromthemetschnikowiapulcherrimasubcladeucd127
AT murrayanthonyl draftgenomesequenceofahighlyheterozygousyeaststrainfromthemetschnikowiapulcherrimasubcladeucd127
AT boyleadrianb draftgenomesequenceofahighlyheterozygousyeaststrainfromthemetschnikowiapulcherrimasubcladeucd127
AT quinnfarringtonlisa draftgenomesequenceofahighlyheterozygousyeaststrainfromthemetschnikowiapulcherrimasubcladeucd127
AT mahertimothyj draftgenomesequenceofahighlyheterozygousyeaststrainfromthemetschnikowiapulcherrimasubcladeucd127
AT ogaorapeadar draftgenomesequenceofahighlyheterozygousyeaststrainfromthemetschnikowiapulcherrimasubcladeucd127
AT wolfekennethh draftgenomesequenceofahighlyheterozygousyeaststrainfromthemetschnikowiapulcherrimasubcladeucd127
AT obriencaoimhee draftgenomesequenceofahighlyheterozygousyeaststrainfromthemetschnikowiapulcherrimasubcladeucd127
AT butlergeraldine draftgenomesequenceofahighlyheterozygousyeaststrainfromthemetschnikowiapulcherrimasubcladeucd127