Cargando…
A Genomic-clinicopathologic Nomogram for the Preoperative Prediction of Lymph Node Metastasis in Bladder Cancer
Preoperative lymph node (LN) status is important for the treatment of bladder cancer (BCa). Here, we report a genomic-clinicopathologic nomogram for preoperatively predicting LN metastasis in BCa. In the discovery stage, 325 BCa patients from TCGA were involved and LN-status-related mRNAs were selec...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6014062/ https://www.ncbi.nlm.nih.gov/pubmed/29655996 http://dx.doi.org/10.1016/j.ebiom.2018.03.034 |
_version_ | 1783334153959243776 |
---|---|
author | Wu, Shao-Xu Huang, Jian Liu, Zhuo-Wei Chen, Hai-Ge Guo, Pi Cai, Qing-Qing Zheng, Jun-Jiong Qin, Hai-De Zheng, Zao-Song Chen, Xin Zhang, Rui-Yun Chen, Si-Liang Lin, Tian-Xin |
author_facet | Wu, Shao-Xu Huang, Jian Liu, Zhuo-Wei Chen, Hai-Ge Guo, Pi Cai, Qing-Qing Zheng, Jun-Jiong Qin, Hai-De Zheng, Zao-Song Chen, Xin Zhang, Rui-Yun Chen, Si-Liang Lin, Tian-Xin |
author_sort | Wu, Shao-Xu |
collection | PubMed |
description | Preoperative lymph node (LN) status is important for the treatment of bladder cancer (BCa). Here, we report a genomic-clinicopathologic nomogram for preoperatively predicting LN metastasis in BCa. In the discovery stage, 325 BCa patients from TCGA were involved and LN-status-related mRNAs were selected. In the training stage, multivariate logistic regression analysis was used to developed a genomic-clinicopathologic nomogram for preoperative LN metastasis prediction in the training set (SYSMH set, n = 178). In the validation stage, we validated the nomogram using two independent sample sets (SYSUCC set, n = 142; RJH set, n = 104) with respect to its discrimination, calibration and clinical usefulness. As results, we identified five LN-status-related mRNAs, including ADRA1D, COL10A1, DKK2, HIST2H3D and MMP11. Then, a genomic classifier was developed to classify patients into high- and low-risk groups in the training set. Furthermore, a nomogram incorporating the five-mRNA-based classifier, image-based LN status, transurethral resection (TUR) T stage, and TUR lymphovascular invasion (LVI) was constructed in the training set, which performed well in the training and validation sets. Decision curve analysis demonstrated the clinical value of our nomogram. Thus, our genomic-clinicopathologic nomogram shows favorable discriminatory ability and may aid in clinical decision-making, especially for cN-patients. |
format | Online Article Text |
id | pubmed-6014062 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-60140622018-06-26 A Genomic-clinicopathologic Nomogram for the Preoperative Prediction of Lymph Node Metastasis in Bladder Cancer Wu, Shao-Xu Huang, Jian Liu, Zhuo-Wei Chen, Hai-Ge Guo, Pi Cai, Qing-Qing Zheng, Jun-Jiong Qin, Hai-De Zheng, Zao-Song Chen, Xin Zhang, Rui-Yun Chen, Si-Liang Lin, Tian-Xin EBioMedicine Research Paper Preoperative lymph node (LN) status is important for the treatment of bladder cancer (BCa). Here, we report a genomic-clinicopathologic nomogram for preoperatively predicting LN metastasis in BCa. In the discovery stage, 325 BCa patients from TCGA were involved and LN-status-related mRNAs were selected. In the training stage, multivariate logistic regression analysis was used to developed a genomic-clinicopathologic nomogram for preoperative LN metastasis prediction in the training set (SYSMH set, n = 178). In the validation stage, we validated the nomogram using two independent sample sets (SYSUCC set, n = 142; RJH set, n = 104) with respect to its discrimination, calibration and clinical usefulness. As results, we identified five LN-status-related mRNAs, including ADRA1D, COL10A1, DKK2, HIST2H3D and MMP11. Then, a genomic classifier was developed to classify patients into high- and low-risk groups in the training set. Furthermore, a nomogram incorporating the five-mRNA-based classifier, image-based LN status, transurethral resection (TUR) T stage, and TUR lymphovascular invasion (LVI) was constructed in the training set, which performed well in the training and validation sets. Decision curve analysis demonstrated the clinical value of our nomogram. Thus, our genomic-clinicopathologic nomogram shows favorable discriminatory ability and may aid in clinical decision-making, especially for cN-patients. Elsevier 2018-03-31 /pmc/articles/PMC6014062/ /pubmed/29655996 http://dx.doi.org/10.1016/j.ebiom.2018.03.034 Text en © 2018 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Paper Wu, Shao-Xu Huang, Jian Liu, Zhuo-Wei Chen, Hai-Ge Guo, Pi Cai, Qing-Qing Zheng, Jun-Jiong Qin, Hai-De Zheng, Zao-Song Chen, Xin Zhang, Rui-Yun Chen, Si-Liang Lin, Tian-Xin A Genomic-clinicopathologic Nomogram for the Preoperative Prediction of Lymph Node Metastasis in Bladder Cancer |
title | A Genomic-clinicopathologic Nomogram for the Preoperative Prediction of Lymph Node Metastasis in Bladder Cancer |
title_full | A Genomic-clinicopathologic Nomogram for the Preoperative Prediction of Lymph Node Metastasis in Bladder Cancer |
title_fullStr | A Genomic-clinicopathologic Nomogram for the Preoperative Prediction of Lymph Node Metastasis in Bladder Cancer |
title_full_unstemmed | A Genomic-clinicopathologic Nomogram for the Preoperative Prediction of Lymph Node Metastasis in Bladder Cancer |
title_short | A Genomic-clinicopathologic Nomogram for the Preoperative Prediction of Lymph Node Metastasis in Bladder Cancer |
title_sort | genomic-clinicopathologic nomogram for the preoperative prediction of lymph node metastasis in bladder cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6014062/ https://www.ncbi.nlm.nih.gov/pubmed/29655996 http://dx.doi.org/10.1016/j.ebiom.2018.03.034 |
work_keys_str_mv | AT wushaoxu agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT huangjian agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT liuzhuowei agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT chenhaige agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT guopi agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT caiqingqing agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT zhengjunjiong agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT qinhaide agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT zhengzaosong agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT chenxin agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT zhangruiyun agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT chensiliang agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT lintianxin agenomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT wushaoxu genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT huangjian genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT liuzhuowei genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT chenhaige genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT guopi genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT caiqingqing genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT zhengjunjiong genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT qinhaide genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT zhengzaosong genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT chenxin genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT zhangruiyun genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT chensiliang genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer AT lintianxin genomicclinicopathologicnomogramforthepreoperativepredictionoflymphnodemetastasisinbladdercancer |