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Characterization of the Temporal Trends in the Rate of Cattle Carcass Condemnations in the US and Dynamic Modeling of the Condemnation Reasons in California With a Seasonal Component

Based on the 2016 National Cattlemen's Beef Association statistics, the cattle inventory in the US reached 93.5 million head, from which 30.5 million were commercial slaughter in 2016. California ranked fourth among all the US states that raise cattle and calves, with 5.15 million head and appr...

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Autores principales: Amirpour Haredasht, Sara, Vidal, Gema, Edmondson, Anita, Moore, Dale, Silva-del-Río, Noelia, Martínez-López, Beatriz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6018506/
https://www.ncbi.nlm.nih.gov/pubmed/29971240
http://dx.doi.org/10.3389/fvets.2018.00087
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author Amirpour Haredasht, Sara
Vidal, Gema
Edmondson, Anita
Moore, Dale
Silva-del-Río, Noelia
Martínez-López, Beatriz
author_facet Amirpour Haredasht, Sara
Vidal, Gema
Edmondson, Anita
Moore, Dale
Silva-del-Río, Noelia
Martínez-López, Beatriz
author_sort Amirpour Haredasht, Sara
collection PubMed
description Based on the 2016 National Cattlemen's Beef Association statistics, the cattle inventory in the US reached 93.5 million head, from which 30.5 million were commercial slaughter in 2016. California ranked fourth among all the US states that raise cattle and calves, with 5.15 million head and approximately 1.18 million slaughtered animals per year. Approximately 0.5% of cattle carcasses in the US are condemned each year, which has an important economic impact on cattle producers.In this study, we first described and compared the temporal trends of cattle carcass condemnations in all the US states from Jan-2005 to Dec-2014. Then, we focused on the condemnation reasons with a seasonal component in California and used dynamic harmonic regression (DHR) models both to model (from Jan-2005 to Dec-2011) and predict (from Jan-2012 to Dec-2014) the carcass condemnations rate in different time horizons (3 to 12 months).Data consisted of daily reports of 35 condemnation reasons per cattle type reported in 684 federally inspected slaughterhouses in the US from Jan-2005 to Dec-2014 and the monthly slaughtered animals per cattle type per states. Almost 1.5 million carcasses were condemned in the US during the 10 year study period (Jan 2005-Dec 2014), and around 40% were associated with three condemnation reasons: malignant lymphoma, septicemia and pneumonia. In California, emaciation, eosinophilic myositis and malignant lymphoma were the only condemnation reasons presenting seasonality and, therefore, the only ones selected to be modeled using DHRs. The DHR models for Jan-2005 to Dec-2011 were able to correctly model the dynamics of the emaciation, malignant lymphoma and eosinophilic myositis condemnation rates with coefficient of determination ([Formula: see text]) of 0.98, 0.87 and 0.78, respectively. The DHR models for Jan-2012 to Dec-2014 were able to predict the rate of condemned carcasses 3 month ahead of time with mean relative prediction error of 33, 11, and 38%, respectively. The systematic analysis of carcass condemnations and slaughter data in a more real-time fashion could be used to identify changes in carcass condemnation trends and more timely support the implementation of prevention and mitigation strategies that reduce the number of carcass condemnations in the US.
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spelling pubmed-60185062018-07-03 Characterization of the Temporal Trends in the Rate of Cattle Carcass Condemnations in the US and Dynamic Modeling of the Condemnation Reasons in California With a Seasonal Component Amirpour Haredasht, Sara Vidal, Gema Edmondson, Anita Moore, Dale Silva-del-Río, Noelia Martínez-López, Beatriz Front Vet Sci Veterinary Science Based on the 2016 National Cattlemen's Beef Association statistics, the cattle inventory in the US reached 93.5 million head, from which 30.5 million were commercial slaughter in 2016. California ranked fourth among all the US states that raise cattle and calves, with 5.15 million head and approximately 1.18 million slaughtered animals per year. Approximately 0.5% of cattle carcasses in the US are condemned each year, which has an important economic impact on cattle producers.In this study, we first described and compared the temporal trends of cattle carcass condemnations in all the US states from Jan-2005 to Dec-2014. Then, we focused on the condemnation reasons with a seasonal component in California and used dynamic harmonic regression (DHR) models both to model (from Jan-2005 to Dec-2011) and predict (from Jan-2012 to Dec-2014) the carcass condemnations rate in different time horizons (3 to 12 months).Data consisted of daily reports of 35 condemnation reasons per cattle type reported in 684 federally inspected slaughterhouses in the US from Jan-2005 to Dec-2014 and the monthly slaughtered animals per cattle type per states. Almost 1.5 million carcasses were condemned in the US during the 10 year study period (Jan 2005-Dec 2014), and around 40% were associated with three condemnation reasons: malignant lymphoma, septicemia and pneumonia. In California, emaciation, eosinophilic myositis and malignant lymphoma were the only condemnation reasons presenting seasonality and, therefore, the only ones selected to be modeled using DHRs. The DHR models for Jan-2005 to Dec-2011 were able to correctly model the dynamics of the emaciation, malignant lymphoma and eosinophilic myositis condemnation rates with coefficient of determination ([Formula: see text]) of 0.98, 0.87 and 0.78, respectively. The DHR models for Jan-2012 to Dec-2014 were able to predict the rate of condemned carcasses 3 month ahead of time with mean relative prediction error of 33, 11, and 38%, respectively. The systematic analysis of carcass condemnations and slaughter data in a more real-time fashion could be used to identify changes in carcass condemnation trends and more timely support the implementation of prevention and mitigation strategies that reduce the number of carcass condemnations in the US. Frontiers Media S.A. 2018-06-19 /pmc/articles/PMC6018506/ /pubmed/29971240 http://dx.doi.org/10.3389/fvets.2018.00087 Text en Copyright © 2018 Amirpour Haredasht, Vidal, Edmondson, Moore, Silva-del-Río and Martínez-López http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Veterinary Science
Amirpour Haredasht, Sara
Vidal, Gema
Edmondson, Anita
Moore, Dale
Silva-del-Río, Noelia
Martínez-López, Beatriz
Characterization of the Temporal Trends in the Rate of Cattle Carcass Condemnations in the US and Dynamic Modeling of the Condemnation Reasons in California With a Seasonal Component
title Characterization of the Temporal Trends in the Rate of Cattle Carcass Condemnations in the US and Dynamic Modeling of the Condemnation Reasons in California With a Seasonal Component
title_full Characterization of the Temporal Trends in the Rate of Cattle Carcass Condemnations in the US and Dynamic Modeling of the Condemnation Reasons in California With a Seasonal Component
title_fullStr Characterization of the Temporal Trends in the Rate of Cattle Carcass Condemnations in the US and Dynamic Modeling of the Condemnation Reasons in California With a Seasonal Component
title_full_unstemmed Characterization of the Temporal Trends in the Rate of Cattle Carcass Condemnations in the US and Dynamic Modeling of the Condemnation Reasons in California With a Seasonal Component
title_short Characterization of the Temporal Trends in the Rate of Cattle Carcass Condemnations in the US and Dynamic Modeling of the Condemnation Reasons in California With a Seasonal Component
title_sort characterization of the temporal trends in the rate of cattle carcass condemnations in the us and dynamic modeling of the condemnation reasons in california with a seasonal component
topic Veterinary Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6018506/
https://www.ncbi.nlm.nih.gov/pubmed/29971240
http://dx.doi.org/10.3389/fvets.2018.00087
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