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Quantitative evaluation of binary digital region asymmetry with application to skin lesion detection

BACKGROUND: The performance of Computer Aided Diagnosis Systems for early melanoma detection relies mainly on quantitative evaluation of the geometric features corresponding to skin lesions. In these systems, diagnosis is carried out by analyzing four geometric characteristics: asymmetry (A), border...

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Autores principales: Sancen-Plaza, Agustin, Santiago-Montero, Raul, Sossa, Humberto, Perez-Pinal, Francisco J., Martinez-Nolasco, Juan J., Padilla-Medina, Jose A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6020345/
https://www.ncbi.nlm.nih.gov/pubmed/29945614
http://dx.doi.org/10.1186/s12911-018-0641-7
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author Sancen-Plaza, Agustin
Santiago-Montero, Raul
Sossa, Humberto
Perez-Pinal, Francisco J.
Martinez-Nolasco, Juan J.
Padilla-Medina, Jose A.
author_facet Sancen-Plaza, Agustin
Santiago-Montero, Raul
Sossa, Humberto
Perez-Pinal, Francisco J.
Martinez-Nolasco, Juan J.
Padilla-Medina, Jose A.
author_sort Sancen-Plaza, Agustin
collection PubMed
description BACKGROUND: The performance of Computer Aided Diagnosis Systems for early melanoma detection relies mainly on quantitative evaluation of the geometric features corresponding to skin lesions. In these systems, diagnosis is carried out by analyzing four geometric characteristics: asymmetry (A), border (B), color (C) and dimension (D). The main objective of this study is to establish an algorithm for the measurement of asymmetry in biological entities. METHODS: Binary digital images corresponding to lesions are divided into 8 segments from their centroid. For each segment, the discrete compactness value is calculated using Normalized E-Factor (NEF). The asymmetry value is obtained from the sum of the square difference of each NEF value and corresponding value of its opposite by the vertex. Two public skin cancer databases were used. 1) Lee’s database with 40 digital regions evaluated by fourteen dermatologists. 2) The PH(2) database which consists of 200 images in an 8-bit RGB format. This database provides a pre-classification of asymmetry carried out by experts, and it also indicates if the lesion is a melanoma. RESULTS: The measure was applied using two skin lesion image databases. 1) In Lee’s database, Spearman test provided a value of 0.82 between diagnosis of dermatologists and asymmetry values. For the 12 binary images most likely to be melanoma, the correlation between the measurement and dermatologists was 0.98. 2) In the PH(2) database a label is provided for each binary image where the type of asymmetry is indicated. Class 0–1 corresponds to symmetry and one axis of symmetry shapes, the completely asymmetrical were assigned to Class 2, the values of sensitivity and specificity were 59.62 and 85.8% respectively between the asymmetry measured by a group of dermatologists and the proposed algorithm. CONCLUSIONS: Simple image digital features such as compactness can be used to quantify the asymmetry of a skin lesion using its digital binary image representation. This measure is stable taking into account translations, rotations, scale changes and can be applied to non-convex regions, including areas with holes.
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spelling pubmed-60203452018-07-06 Quantitative evaluation of binary digital region asymmetry with application to skin lesion detection Sancen-Plaza, Agustin Santiago-Montero, Raul Sossa, Humberto Perez-Pinal, Francisco J. Martinez-Nolasco, Juan J. Padilla-Medina, Jose A. BMC Med Inform Decis Mak Research Article BACKGROUND: The performance of Computer Aided Diagnosis Systems for early melanoma detection relies mainly on quantitative evaluation of the geometric features corresponding to skin lesions. In these systems, diagnosis is carried out by analyzing four geometric characteristics: asymmetry (A), border (B), color (C) and dimension (D). The main objective of this study is to establish an algorithm for the measurement of asymmetry in biological entities. METHODS: Binary digital images corresponding to lesions are divided into 8 segments from their centroid. For each segment, the discrete compactness value is calculated using Normalized E-Factor (NEF). The asymmetry value is obtained from the sum of the square difference of each NEF value and corresponding value of its opposite by the vertex. Two public skin cancer databases were used. 1) Lee’s database with 40 digital regions evaluated by fourteen dermatologists. 2) The PH(2) database which consists of 200 images in an 8-bit RGB format. This database provides a pre-classification of asymmetry carried out by experts, and it also indicates if the lesion is a melanoma. RESULTS: The measure was applied using two skin lesion image databases. 1) In Lee’s database, Spearman test provided a value of 0.82 between diagnosis of dermatologists and asymmetry values. For the 12 binary images most likely to be melanoma, the correlation between the measurement and dermatologists was 0.98. 2) In the PH(2) database a label is provided for each binary image where the type of asymmetry is indicated. Class 0–1 corresponds to symmetry and one axis of symmetry shapes, the completely asymmetrical were assigned to Class 2, the values of sensitivity and specificity were 59.62 and 85.8% respectively between the asymmetry measured by a group of dermatologists and the proposed algorithm. CONCLUSIONS: Simple image digital features such as compactness can be used to quantify the asymmetry of a skin lesion using its digital binary image representation. This measure is stable taking into account translations, rotations, scale changes and can be applied to non-convex regions, including areas with holes. BioMed Central 2018-06-27 /pmc/articles/PMC6020345/ /pubmed/29945614 http://dx.doi.org/10.1186/s12911-018-0641-7 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Sancen-Plaza, Agustin
Santiago-Montero, Raul
Sossa, Humberto
Perez-Pinal, Francisco J.
Martinez-Nolasco, Juan J.
Padilla-Medina, Jose A.
Quantitative evaluation of binary digital region asymmetry with application to skin lesion detection
title Quantitative evaluation of binary digital region asymmetry with application to skin lesion detection
title_full Quantitative evaluation of binary digital region asymmetry with application to skin lesion detection
title_fullStr Quantitative evaluation of binary digital region asymmetry with application to skin lesion detection
title_full_unstemmed Quantitative evaluation of binary digital region asymmetry with application to skin lesion detection
title_short Quantitative evaluation of binary digital region asymmetry with application to skin lesion detection
title_sort quantitative evaluation of binary digital region asymmetry with application to skin lesion detection
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6020345/
https://www.ncbi.nlm.nih.gov/pubmed/29945614
http://dx.doi.org/10.1186/s12911-018-0641-7
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