Cargando…

Comparative genome-wide characterization leading to simple sequence repeat marker development for Nicotiana

BACKGROUND: Simple sequence repeats (SSRs) are tandem repeats of DNA that have been used to develop robust genetic markers. These molecular markers are powerful tools for basic and applied studies such as molecular breeding. In the model plants in Nicotiana genus e.g. N. benthamiana, a comprehensive...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wang, Xuewen, Yang, Shuai, Chen, Yongdui, Zhang, Shumeng, Zhao, Qingshi, Li, Meng, Gao, Yulong, Yang, Long, Bennetzen, Jeffrey L.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2018
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6020451/ https://www.ncbi.nlm.nih.gov/pubmed/29945549 http://dx.doi.org/10.1186/s12864-018-4878-4

Ejemplares similares

Genome-wide characterization leading to simple sequence repeat (SSR) markers development in Shorea robusta
por: Mishra, Garima, et al.
Publicado: (2023)

Genome Sequence Analysis of Enterobacter sp. C6, Found in the Pitcher Fluids of Sarracenia rosea
por: Zhang, Shumeng, et al.
Publicado: (2020)

Draft Genome Sequence of a Serratia marcescens Strain Isolated from the Pitcher Fluids of a Sarracenia Pitcher Plant
por: Zhang, Shumeng, et al.
Publicado: (2020)

Integrating transcriptome and microRNA analysis identifies genes and microRNAs for AHO-induced systemic acquired resistance in N. tabacum
por: Chen, Yongdui, et al.
Publicado: (2017)

Development and Characterization of Simple Sequence Repeat Markers Providing Genome-Wide Coverage and High Resolution in Maize
por: Xu, Jie, et al.
Publicado: (2013)

Genetic Diversity and Population Structure of Cannabis Based on the Genome-Wide Development of Simple Sequence Repeat Markers
por: Zhang, Jiangjiang, et al.
Publicado: (2020)

Genome-wide characterization of simple sequence repeats in Palmae genomes
por: Manee, Manee M., et al.
Publicado: (2020)

Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.)
por: Cavagnaro, Pablo F, et al.
Publicado: (2010)

Simple sequence repeat markers that identify Claviceps species and strains
por: Gilmore, Barbara S., et al.
Publicado: (2016)

Development of simple sequence repeat markers for Chamerion angustifolium (Onagraceae)
por: Mi, Rui, et al.
Publicado: (2019)

Genome-wide identification of simple sequence repeats and development of polymorphic SSR markers in swamp eel (Monopterus albus)
por: Tian, Hai-feng, et al.
Publicado: (2021)

A genome-wide analysis of simple sequence repeats in maize and the development of polymorphism markers from next-generation sequence data
por: Qu, Jingtao, et al.
Publicado: (2013)

Genome-wide simple sequence repeats (SSR) markers discovered from whole-genome sequence comparisons of multiple spinach accessions
por: Bhattarai, Gehendra, et al.
Publicado: (2021)

Genome-wide characterization of simple sequence repeats in Pyrus bretschneideri and their application in an analysis of genetic diversity in pear
por: Xue, Huabai, et al.
Publicado: (2018)

Discovery and assembly of repeat family pseudomolecules from sparse genomic sequence data using the Assisted Automated Assembler of Repeat Families (AAARF) algorithm
por: DeBarry, Jeremy D, et al.
Publicado: (2008)

Development of Genome-wide Simple Sequence Repeat Markers Using Whole-genome Shotgun Sequences of Sorghum (Sorghum bicolor (L.) Moench)
por: Yonemaru, Jun-ichi, et al.
Publicado: (2009)

Development of polymorphic simple sequence repeat markers in Huperzia serrata (Lycopodiaceae)
por: Guo, Bin, et al.
Publicado: (2019)

Selection of Sweetpotato Parental Genotypes Using Simple Sequence Repeat Markers
por: Naidoo, Sonia I. M., et al.
Publicado: (2022)

Genome-Wide Analysis of Simple Sequence Repeats in Bitter Gourd (Momordica charantia)
por: Cui, Junjie, et al.
Publicado: (2017)

Genome-Wide Analysis of Simple Sequence Repeats in Cabbage (Brassica oleracea L.)
por: Xu, Yuanyuan, et al.
Publicado: (2021)

Genome-wide repeat dynamics reflect phylogenetic distance in closely related allotetraploid Nicotiana (Solanaceae)
por: Dodsworth, Steven, et al.
Publicado: (2016)

Author Correction: Genome-wide simple sequence repeats (SSR) markers discovered from whole-genome sequence comparisons of multiple spinach accessions
por: Bhattarai, Gehendra, et al.
Publicado: (2022)

Development of genome-wide informative simple sequence repeat markers for large-scale genotyping applications in chickpea and development of web resource
por: Parida, Swarup K., et al.
Publicado: (2015)

citSATdb: Genome-Wide Simple Sequence Repeat (SSR) Marker Database of Citrus Species for Germplasm Characterization and Crop Improvement
por: Duhan, Naveen, et al.
Publicado: (2020)

Characterization of porcine simple sequence repeat variation on a population scale with genome resequencing data
por: Liu, Congcong, et al.
Publicado: (2017)

Marker-assisted sex differentiation in date palm using simple sequence repeats
por: Elmeer, Khaled, et al.
Publicado: (2012)

Transcriptome characterisation and simple sequence repeat marker discovery in the seagrass Posidonia oceanica
por: D’Esposito, D., et al.
Publicado: (2016)

Genetic Diversity of Ascaris in China Assessed Using Simple Sequence Repeat Markers
por: Zhou, Chunhua, et al.
Publicado: (2018)

Pronounced genetic differentiation in Fokienia hodginsii revealed by simple sequence repeat markers
por: Yin, Qianyi, et al.
Publicado: (2018)

Parentage analysis of tea cultivars in Japan based on simple sequence repeat markers
por: Kubo, Nakao, et al.
Publicado: (2021)

Characterization of Simple Sequence Repeat (SSR) Markers Mined in Whole Grape Genomes
por: Pei, Dan, et al.
Publicado: (2023)

Genetic Diversity Analysis of Soybean Collection Using Simple Sequence Repeat Markers
por: Zatybekov, Alibek, et al.
Publicado: (2023)

Development of simple sequence repeat markers for sugarcane from data mining of expressed sequence tags
por: Jiang, Huahao, et al.
Publicado: (2023)

Development of Simple Sequence Repeat Markers and Genetic Diversity Evaluation of Mycocentrospora acerina in Yunnan Province, China
por: Wang, Huiling, et al.
Publicado: (2023)

Fatty Acid Profile and Unigene-Derived Simple Sequence Repeat Markers in Tung Tree (Vernicia fordii)
por: Zhang, Lin, et al.
Publicado: (2014)

Genome-Wide Characterization and Comparative Analyses of Simple Sequence Repeats among Four Miniature Pig Breeds
por: Wang, Hongyang, et al.
Publicado: (2020)

Development of highly polymorphic simple sequence repeat markers using genome-wide microsatellite variant analysis in Foxtail millet [Setaria italica (L.) P. Beauv.]
por: Zhang, Shuo, et al.
Publicado: (2014)

Comprehensive Analyses of Simple Sequence Repeat (SSR) in Bamboo Genomes and Development of SSR Markers with Peroxidase Genes
por: Liu, Yan, et al.
Publicado: (2022)

Sequencing and characterization of leaf transcriptomes of six diploid Nicotiana species
por: Long, Ni, et al.
Publicado: (2016)

Genetic variation and DNA fingerprinting of durian types in Malaysia using simple sequence repeat (SSR) markers
por: Siew, Ging Yang, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_fh21ln83jlqtqg28tqage9gdm8