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A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data
There is currently a lack of an efficient, objective and systemic approach towards the classification of Alzheimer’s disease (AD), due to its complex etiology and pathogenesis. As AD is inherently dynamic, it is also not clear how the relationships among AD indicators vary over time. To address thes...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6021389/ https://www.ncbi.nlm.nih.gov/pubmed/29950585 http://dx.doi.org/10.1038/s41598-018-27997-8 |
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author | Ding, Xuemei Bucholc, Magda Wang, Haiying Glass, David H. Wang, Hui Clarke, Dave H. Bjourson, Anthony John Dowey, Le Roy C. O’Kane, Maurice Prasad, Girijesh Maguire, Liam Wong-Lin, KongFatt |
author_facet | Ding, Xuemei Bucholc, Magda Wang, Haiying Glass, David H. Wang, Hui Clarke, Dave H. Bjourson, Anthony John Dowey, Le Roy C. O’Kane, Maurice Prasad, Girijesh Maguire, Liam Wong-Lin, KongFatt |
author_sort | Ding, Xuemei |
collection | PubMed |
description | There is currently a lack of an efficient, objective and systemic approach towards the classification of Alzheimer’s disease (AD), due to its complex etiology and pathogenesis. As AD is inherently dynamic, it is also not clear how the relationships among AD indicators vary over time. To address these issues, we propose a hybrid computational approach for AD classification and evaluate it on the heterogeneous longitudinal AIBL dataset. Specifically, using clinical dementia rating as an index of AD severity, the most important indicators (mini-mental state examination, logical memory recall, grey matter and cerebrospinal volumes from MRI and active voxels from PiB-PET brain scans, ApoE, and age) can be automatically identified from parallel data mining algorithms. In this work, Bayesian network modelling across different time points is used to identify and visualize time-varying relationships among the significant features, and importantly, in an efficient way using only coarse-grained data. Crucially, our approach suggests key data features and their appropriate combinations that are relevant for AD severity classification with high accuracy. Overall, our study provides insights into AD developments and demonstrates the potential of our approach in supporting efficient AD diagnosis. |
format | Online Article Text |
id | pubmed-6021389 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-60213892018-07-06 A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data Ding, Xuemei Bucholc, Magda Wang, Haiying Glass, David H. Wang, Hui Clarke, Dave H. Bjourson, Anthony John Dowey, Le Roy C. O’Kane, Maurice Prasad, Girijesh Maguire, Liam Wong-Lin, KongFatt Sci Rep Article There is currently a lack of an efficient, objective and systemic approach towards the classification of Alzheimer’s disease (AD), due to its complex etiology and pathogenesis. As AD is inherently dynamic, it is also not clear how the relationships among AD indicators vary over time. To address these issues, we propose a hybrid computational approach for AD classification and evaluate it on the heterogeneous longitudinal AIBL dataset. Specifically, using clinical dementia rating as an index of AD severity, the most important indicators (mini-mental state examination, logical memory recall, grey matter and cerebrospinal volumes from MRI and active voxels from PiB-PET brain scans, ApoE, and age) can be automatically identified from parallel data mining algorithms. In this work, Bayesian network modelling across different time points is used to identify and visualize time-varying relationships among the significant features, and importantly, in an efficient way using only coarse-grained data. Crucially, our approach suggests key data features and their appropriate combinations that are relevant for AD severity classification with high accuracy. Overall, our study provides insights into AD developments and demonstrates the potential of our approach in supporting efficient AD diagnosis. Nature Publishing Group UK 2018-06-27 /pmc/articles/PMC6021389/ /pubmed/29950585 http://dx.doi.org/10.1038/s41598-018-27997-8 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Ding, Xuemei Bucholc, Magda Wang, Haiying Glass, David H. Wang, Hui Clarke, Dave H. Bjourson, Anthony John Dowey, Le Roy C. O’Kane, Maurice Prasad, Girijesh Maguire, Liam Wong-Lin, KongFatt A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data |
title | A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data |
title_full | A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data |
title_fullStr | A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data |
title_full_unstemmed | A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data |
title_short | A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data |
title_sort | hybrid computational approach for efficient alzheimer’s disease classification based on heterogeneous data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6021389/ https://www.ncbi.nlm.nih.gov/pubmed/29950585 http://dx.doi.org/10.1038/s41598-018-27997-8 |
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