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A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data

There is currently a lack of an efficient, objective and systemic approach towards the classification of Alzheimer’s disease (AD), due to its complex etiology and pathogenesis. As AD is inherently dynamic, it is also not clear how the relationships among AD indicators vary over time. To address thes...

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Autores principales: Ding, Xuemei, Bucholc, Magda, Wang, Haiying, Glass, David H., Wang, Hui, Clarke, Dave H., Bjourson, Anthony John, Dowey, Le Roy C., O’Kane, Maurice, Prasad, Girijesh, Maguire, Liam, Wong-Lin, KongFatt
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6021389/
https://www.ncbi.nlm.nih.gov/pubmed/29950585
http://dx.doi.org/10.1038/s41598-018-27997-8
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author Ding, Xuemei
Bucholc, Magda
Wang, Haiying
Glass, David H.
Wang, Hui
Clarke, Dave H.
Bjourson, Anthony John
Dowey, Le Roy C.
O’Kane, Maurice
Prasad, Girijesh
Maguire, Liam
Wong-Lin, KongFatt
author_facet Ding, Xuemei
Bucholc, Magda
Wang, Haiying
Glass, David H.
Wang, Hui
Clarke, Dave H.
Bjourson, Anthony John
Dowey, Le Roy C.
O’Kane, Maurice
Prasad, Girijesh
Maguire, Liam
Wong-Lin, KongFatt
author_sort Ding, Xuemei
collection PubMed
description There is currently a lack of an efficient, objective and systemic approach towards the classification of Alzheimer’s disease (AD), due to its complex etiology and pathogenesis. As AD is inherently dynamic, it is also not clear how the relationships among AD indicators vary over time. To address these issues, we propose a hybrid computational approach for AD classification and evaluate it on the heterogeneous longitudinal AIBL dataset. Specifically, using clinical dementia rating as an index of AD severity, the most important indicators (mini-mental state examination, logical memory recall, grey matter and cerebrospinal volumes from MRI and active voxels from PiB-PET brain scans, ApoE, and age) can be automatically identified from parallel data mining algorithms. In this work, Bayesian network modelling across different time points is used to identify and visualize time-varying relationships among the significant features, and importantly, in an efficient way using only coarse-grained data. Crucially, our approach suggests key data features and their appropriate combinations that are relevant for AD severity classification with high accuracy. Overall, our study provides insights into AD developments and demonstrates the potential of our approach in supporting efficient AD diagnosis.
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spelling pubmed-60213892018-07-06 A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data Ding, Xuemei Bucholc, Magda Wang, Haiying Glass, David H. Wang, Hui Clarke, Dave H. Bjourson, Anthony John Dowey, Le Roy C. O’Kane, Maurice Prasad, Girijesh Maguire, Liam Wong-Lin, KongFatt Sci Rep Article There is currently a lack of an efficient, objective and systemic approach towards the classification of Alzheimer’s disease (AD), due to its complex etiology and pathogenesis. As AD is inherently dynamic, it is also not clear how the relationships among AD indicators vary over time. To address these issues, we propose a hybrid computational approach for AD classification and evaluate it on the heterogeneous longitudinal AIBL dataset. Specifically, using clinical dementia rating as an index of AD severity, the most important indicators (mini-mental state examination, logical memory recall, grey matter and cerebrospinal volumes from MRI and active voxels from PiB-PET brain scans, ApoE, and age) can be automatically identified from parallel data mining algorithms. In this work, Bayesian network modelling across different time points is used to identify and visualize time-varying relationships among the significant features, and importantly, in an efficient way using only coarse-grained data. Crucially, our approach suggests key data features and their appropriate combinations that are relevant for AD severity classification with high accuracy. Overall, our study provides insights into AD developments and demonstrates the potential of our approach in supporting efficient AD diagnosis. Nature Publishing Group UK 2018-06-27 /pmc/articles/PMC6021389/ /pubmed/29950585 http://dx.doi.org/10.1038/s41598-018-27997-8 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Ding, Xuemei
Bucholc, Magda
Wang, Haiying
Glass, David H.
Wang, Hui
Clarke, Dave H.
Bjourson, Anthony John
Dowey, Le Roy C.
O’Kane, Maurice
Prasad, Girijesh
Maguire, Liam
Wong-Lin, KongFatt
A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data
title A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data
title_full A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data
title_fullStr A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data
title_full_unstemmed A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data
title_short A hybrid computational approach for efficient Alzheimer’s disease classification based on heterogeneous data
title_sort hybrid computational approach for efficient alzheimer’s disease classification based on heterogeneous data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6021389/
https://www.ncbi.nlm.nih.gov/pubmed/29950585
http://dx.doi.org/10.1038/s41598-018-27997-8
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