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Training for translation between disciplines: a philosophy for life and data sciences curricula

MOTIVATION: Our society has become data-rich to the extent that research in many areas has become impossible without computational approaches. Educational programmes seem to be lagging behind this development. At the same time, there is a growing need not only for strong data science skills, but for...

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Autores principales: Anton Feenstra, K, Abeln, Sanne, Westerhuis, Johan A, Brancos dos Santos, Filipe, Molenaar, Douwe, Teusink, Bas, Hoefsloot, Huub C J, Heringa, Jaap
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6022589/
https://www.ncbi.nlm.nih.gov/pubmed/29950011
http://dx.doi.org/10.1093/bioinformatics/bty233
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author Anton Feenstra, K
Abeln, Sanne
Westerhuis, Johan A
Brancos dos Santos, Filipe
Molenaar, Douwe
Teusink, Bas
Hoefsloot, Huub C J
Heringa, Jaap
author_facet Anton Feenstra, K
Abeln, Sanne
Westerhuis, Johan A
Brancos dos Santos, Filipe
Molenaar, Douwe
Teusink, Bas
Hoefsloot, Huub C J
Heringa, Jaap
author_sort Anton Feenstra, K
collection PubMed
description MOTIVATION: Our society has become data-rich to the extent that research in many areas has become impossible without computational approaches. Educational programmes seem to be lagging behind this development. At the same time, there is a growing need not only for strong data science skills, but foremost for the ability to both translate between tools and methods on the one hand, and application and problems on the other. RESULTS: Here we present our experiences with shaping and running a masters’ programme in bioinformatics and systems biology in Amsterdam. From this, we have developed a comprehensive philosophy on how translation in training may be achieved in a dynamic and multidisciplinary research area, which is described here. We furthermore describe two requirements that enable translation, which we have found to be crucial: sufficient depth and focus on multidisciplinary topic areas, coupled with a balanced breadth from adjacent disciplines. Finally, we present concrete suggestions on how this may be implemented in practice, which may be relevant for the effectiveness of life science and data science curricula in general, and of particular interest to those who are in the process of setting up such curricula. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
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spelling pubmed-60225892018-07-10 Training for translation between disciplines: a philosophy for life and data sciences curricula Anton Feenstra, K Abeln, Sanne Westerhuis, Johan A Brancos dos Santos, Filipe Molenaar, Douwe Teusink, Bas Hoefsloot, Huub C J Heringa, Jaap Bioinformatics Ismb 2018–Intelligent Systems for Molecular Biology Proceedings MOTIVATION: Our society has become data-rich to the extent that research in many areas has become impossible without computational approaches. Educational programmes seem to be lagging behind this development. At the same time, there is a growing need not only for strong data science skills, but foremost for the ability to both translate between tools and methods on the one hand, and application and problems on the other. RESULTS: Here we present our experiences with shaping and running a masters’ programme in bioinformatics and systems biology in Amsterdam. From this, we have developed a comprehensive philosophy on how translation in training may be achieved in a dynamic and multidisciplinary research area, which is described here. We furthermore describe two requirements that enable translation, which we have found to be crucial: sufficient depth and focus on multidisciplinary topic areas, coupled with a balanced breadth from adjacent disciplines. Finally, we present concrete suggestions on how this may be implemented in practice, which may be relevant for the effectiveness of life science and data science curricula in general, and of particular interest to those who are in the process of setting up such curricula. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online. Oxford University Press 2018-07-01 2018-06-27 /pmc/articles/PMC6022589/ /pubmed/29950011 http://dx.doi.org/10.1093/bioinformatics/bty233 Text en © The Author(s) 2018. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Ismb 2018–Intelligent Systems for Molecular Biology Proceedings
Anton Feenstra, K
Abeln, Sanne
Westerhuis, Johan A
Brancos dos Santos, Filipe
Molenaar, Douwe
Teusink, Bas
Hoefsloot, Huub C J
Heringa, Jaap
Training for translation between disciplines: a philosophy for life and data sciences curricula
title Training for translation between disciplines: a philosophy for life and data sciences curricula
title_full Training for translation between disciplines: a philosophy for life and data sciences curricula
title_fullStr Training for translation between disciplines: a philosophy for life and data sciences curricula
title_full_unstemmed Training for translation between disciplines: a philosophy for life and data sciences curricula
title_short Training for translation between disciplines: a philosophy for life and data sciences curricula
title_sort training for translation between disciplines: a philosophy for life and data sciences curricula
topic Ismb 2018–Intelligent Systems for Molecular Biology Proceedings
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6022589/
https://www.ncbi.nlm.nih.gov/pubmed/29950011
http://dx.doi.org/10.1093/bioinformatics/bty233
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