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Protein Expression Profile of Twenty-Week-Old Diabetic db/db and Non-Diabetic Mice Livers: A Proteomic and Bioinformatic Analysis

Type 2 diabetes mellitus is characterized by insulin resistance in the liver. Insulin is not only involved in carbohydrate metabolism, it also regulates protein synthesis. This work describes the expression of proteins in the liver of a diabetic mouse and identifies the metabolic pathways involved....

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Autores principales: Guzmán-Flores, Juan Manuel, Flores-Pérez, Elsa Cristina, Hernández-Ortiz, Magdalena, Vargas-Ortiz, Katya, Ramírez-Emiliano, Joel, Encarnación-Guevara, Sergio, Pérez-Vázquez, Victoriano
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6023011/
https://www.ncbi.nlm.nih.gov/pubmed/29857581
http://dx.doi.org/10.3390/biom8020035
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author Guzmán-Flores, Juan Manuel
Flores-Pérez, Elsa Cristina
Hernández-Ortiz, Magdalena
Vargas-Ortiz, Katya
Ramírez-Emiliano, Joel
Encarnación-Guevara, Sergio
Pérez-Vázquez, Victoriano
author_facet Guzmán-Flores, Juan Manuel
Flores-Pérez, Elsa Cristina
Hernández-Ortiz, Magdalena
Vargas-Ortiz, Katya
Ramírez-Emiliano, Joel
Encarnación-Guevara, Sergio
Pérez-Vázquez, Victoriano
author_sort Guzmán-Flores, Juan Manuel
collection PubMed
description Type 2 diabetes mellitus is characterized by insulin resistance in the liver. Insulin is not only involved in carbohydrate metabolism, it also regulates protein synthesis. This work describes the expression of proteins in the liver of a diabetic mouse and identifies the metabolic pathways involved. Twenty-week-old diabetic db/db mice were hepatectomized, after which proteins were separated by 2D-Polyacrylamide Gel Electrophoresis (2D-PAGE). Spots varying in intensity were analyzed using mass spectrometry, and biological function was assigned by the Database for Annotation, Visualization and Integrated Discovery (DAVID) software. A differential expression of 26 proteins was identified; among these were arginase-1, pyruvate carboxylase, peroxiredoxin-1, regucalcin, and sorbitol dehydrogenase. Bioinformatics analysis indicated that many of these proteins are mitochondrial and participate in metabolic pathways, such as the citrate cycle, the fructose and mannose metabolism, and glycolysis or gluconeogenesis. In addition, these proteins are related to oxidation–reduction reactions and molecular function of vitamin binding and amino acid metabolism. In conclusion, the proteomic profile of the liver of diabetic mouse db/db exhibited mainly alterations in the metabolism of carbohydrates and nitrogen. These differences illustrate the heterogeneity of diabetes in its different stages and under different conditions and highlights the need to improve treatments for this disease.
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spelling pubmed-60230112018-07-02 Protein Expression Profile of Twenty-Week-Old Diabetic db/db and Non-Diabetic Mice Livers: A Proteomic and Bioinformatic Analysis Guzmán-Flores, Juan Manuel Flores-Pérez, Elsa Cristina Hernández-Ortiz, Magdalena Vargas-Ortiz, Katya Ramírez-Emiliano, Joel Encarnación-Guevara, Sergio Pérez-Vázquez, Victoriano Biomolecules Article Type 2 diabetes mellitus is characterized by insulin resistance in the liver. Insulin is not only involved in carbohydrate metabolism, it also regulates protein synthesis. This work describes the expression of proteins in the liver of a diabetic mouse and identifies the metabolic pathways involved. Twenty-week-old diabetic db/db mice were hepatectomized, after which proteins were separated by 2D-Polyacrylamide Gel Electrophoresis (2D-PAGE). Spots varying in intensity were analyzed using mass spectrometry, and biological function was assigned by the Database for Annotation, Visualization and Integrated Discovery (DAVID) software. A differential expression of 26 proteins was identified; among these were arginase-1, pyruvate carboxylase, peroxiredoxin-1, regucalcin, and sorbitol dehydrogenase. Bioinformatics analysis indicated that many of these proteins are mitochondrial and participate in metabolic pathways, such as the citrate cycle, the fructose and mannose metabolism, and glycolysis or gluconeogenesis. In addition, these proteins are related to oxidation–reduction reactions and molecular function of vitamin binding and amino acid metabolism. In conclusion, the proteomic profile of the liver of diabetic mouse db/db exhibited mainly alterations in the metabolism of carbohydrates and nitrogen. These differences illustrate the heterogeneity of diabetes in its different stages and under different conditions and highlights the need to improve treatments for this disease. MDPI 2018-06-01 /pmc/articles/PMC6023011/ /pubmed/29857581 http://dx.doi.org/10.3390/biom8020035 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Guzmán-Flores, Juan Manuel
Flores-Pérez, Elsa Cristina
Hernández-Ortiz, Magdalena
Vargas-Ortiz, Katya
Ramírez-Emiliano, Joel
Encarnación-Guevara, Sergio
Pérez-Vázquez, Victoriano
Protein Expression Profile of Twenty-Week-Old Diabetic db/db and Non-Diabetic Mice Livers: A Proteomic and Bioinformatic Analysis
title Protein Expression Profile of Twenty-Week-Old Diabetic db/db and Non-Diabetic Mice Livers: A Proteomic and Bioinformatic Analysis
title_full Protein Expression Profile of Twenty-Week-Old Diabetic db/db and Non-Diabetic Mice Livers: A Proteomic and Bioinformatic Analysis
title_fullStr Protein Expression Profile of Twenty-Week-Old Diabetic db/db and Non-Diabetic Mice Livers: A Proteomic and Bioinformatic Analysis
title_full_unstemmed Protein Expression Profile of Twenty-Week-Old Diabetic db/db and Non-Diabetic Mice Livers: A Proteomic and Bioinformatic Analysis
title_short Protein Expression Profile of Twenty-Week-Old Diabetic db/db and Non-Diabetic Mice Livers: A Proteomic and Bioinformatic Analysis
title_sort protein expression profile of twenty-week-old diabetic db/db and non-diabetic mice livers: a proteomic and bioinformatic analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6023011/
https://www.ncbi.nlm.nih.gov/pubmed/29857581
http://dx.doi.org/10.3390/biom8020035
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