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Renal DCE-MRI Model Selection Using Bayesian Probability Theory

The goal of this work was to demonstrate the utility of Bayesian probability theory-based model selection for choosing the optimal mathematical model from among 4 competing models of renal dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) data. DCE-MRI data were collected on 21 mice wit...

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Autores principales: Beeman, Scott C., Osei-Owusu, Patrick, Duan, Chong, Engelbach, John, Bretthorst, G. Larry, Ackerman, Joseph J. H., Blumer, Kendall J., Garbow, Joel R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Grapho Publications, LLC 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6024409/
https://www.ncbi.nlm.nih.gov/pubmed/30042955
http://dx.doi.org/10.18383/j.tom.2015.00133
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author Beeman, Scott C.
Osei-Owusu, Patrick
Duan, Chong
Engelbach, John
Bretthorst, G. Larry
Ackerman, Joseph J. H.
Blumer, Kendall J.
Garbow, Joel R.
author_facet Beeman, Scott C.
Osei-Owusu, Patrick
Duan, Chong
Engelbach, John
Bretthorst, G. Larry
Ackerman, Joseph J. H.
Blumer, Kendall J.
Garbow, Joel R.
author_sort Beeman, Scott C.
collection PubMed
description The goal of this work was to demonstrate the utility of Bayesian probability theory-based model selection for choosing the optimal mathematical model from among 4 competing models of renal dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) data. DCE-MRI data were collected on 21 mice with high (n = 7), low (n = 7), or normal (n = 7) renal blood flow (RBF). Model parameters and posterior probabilities of 4 renal DCE-MRI models were estimated using Bayesian-based methods. Models investigated included (1) an empirical model that contained a monoexponential decay (washout) term and a constant offset, (2) an empirical model with a biexponential decay term (empirical/biexponential model), (3) the Patlak–Rutland model, and (4) the 2-compartment kidney model. Joint Bayesian model selection/parameter estimation demonstrated that the empirical/biexponential model was strongly favored for all 3 cohorts, the modeled DCE signals that characterized each of the 3 cohorts were distinctly different, and individual empirical/biexponential model parameter values clearly distinguished cohorts of low and high RBF from one another. The Bayesian methods can be readily extended to a variety of model analyses, making it a versatile and valuable tool for model selection and parameter estimation.
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spelling pubmed-60244092018-07-24 Renal DCE-MRI Model Selection Using Bayesian Probability Theory Beeman, Scott C. Osei-Owusu, Patrick Duan, Chong Engelbach, John Bretthorst, G. Larry Ackerman, Joseph J. H. Blumer, Kendall J. Garbow, Joel R. Tomography Research Article The goal of this work was to demonstrate the utility of Bayesian probability theory-based model selection for choosing the optimal mathematical model from among 4 competing models of renal dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) data. DCE-MRI data were collected on 21 mice with high (n = 7), low (n = 7), or normal (n = 7) renal blood flow (RBF). Model parameters and posterior probabilities of 4 renal DCE-MRI models were estimated using Bayesian-based methods. Models investigated included (1) an empirical model that contained a monoexponential decay (washout) term and a constant offset, (2) an empirical model with a biexponential decay term (empirical/biexponential model), (3) the Patlak–Rutland model, and (4) the 2-compartment kidney model. Joint Bayesian model selection/parameter estimation demonstrated that the empirical/biexponential model was strongly favored for all 3 cohorts, the modeled DCE signals that characterized each of the 3 cohorts were distinctly different, and individual empirical/biexponential model parameter values clearly distinguished cohorts of low and high RBF from one another. The Bayesian methods can be readily extended to a variety of model analyses, making it a versatile and valuable tool for model selection and parameter estimation. Grapho Publications, LLC 2015-09 /pmc/articles/PMC6024409/ /pubmed/30042955 http://dx.doi.org/10.18383/j.tom.2015.00133 Text en © 2015 The Authors. Published by Grapho Publications, LLC http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Article
Beeman, Scott C.
Osei-Owusu, Patrick
Duan, Chong
Engelbach, John
Bretthorst, G. Larry
Ackerman, Joseph J. H.
Blumer, Kendall J.
Garbow, Joel R.
Renal DCE-MRI Model Selection Using Bayesian Probability Theory
title Renal DCE-MRI Model Selection Using Bayesian Probability Theory
title_full Renal DCE-MRI Model Selection Using Bayesian Probability Theory
title_fullStr Renal DCE-MRI Model Selection Using Bayesian Probability Theory
title_full_unstemmed Renal DCE-MRI Model Selection Using Bayesian Probability Theory
title_short Renal DCE-MRI Model Selection Using Bayesian Probability Theory
title_sort renal dce-mri model selection using bayesian probability theory
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6024409/
https://www.ncbi.nlm.nih.gov/pubmed/30042955
http://dx.doi.org/10.18383/j.tom.2015.00133
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