Cargando…

Trans-Allelic Model for Prediction of Peptide:MHC-II Interactions

Major histocompatibility complex class two (MHC-II) molecules are trans-membrane proteins and key components of the cellular immune system. Upon recognition of foreign peptides expressed on the MHC-II binding groove, CD4(+) T cells mount an immune response against invading pathogens. Therefore, mech...

Descripción completa

Detalles Bibliográficos
Autores principales:	Degoot, Abdoelnaser M., Chirove, Faraimunashe, Ndifon, Wilfred
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2018
Materias:	Immunology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6026802/ https://www.ncbi.nlm.nih.gov/pubmed/29988560 http://dx.doi.org/10.3389/fimmu.2018.01410

Ejemplares similares

Predicting Antigenicity of Influenza A Viruses Using biophysical ideas
por: Degoot, Abdoelnaser M., et al.
Publicado: (2019)

Monitoring the Dynamics of T Cell Clonal Diversity Using Recombinant Peptide:MHC Technology
por: Blanchfield, J. Lori, et al.
Publicado: (2013)

Computationally profiling peptide:MHC recognition by T-cell receptors and T-cell receptor-mimetic antibodies
por: Raybould, Matthew I. J., et al.
Publicado: (2023)

Perturbations in the T cell receptor β repertoire during malaria infection in children: A preliminary study
por: Frimpong, Augustina, et al.
Publicado: (2022)

Derivation of an amino acid similarity matrix for peptide:MHC binding and its application as a Bayesian prior
por: Kim, Yohan, et al.
Publicado: (2009)

Understanding the transmission pathways of Lassa fever: A mathematical modeling approach
por: Madueme, Praise-God Uchechukwu, et al.
Publicado: (2022)

Thermodynamics of Peptide-MHC Class II Interactions: Not all Complexes are Created Equal
por: Ferrante, Andrea
Publicado: (2013)

From Chickens to Humans: The Importance of Peptide Repertoires for MHC Class I Alleles
por: Kaufman, Jim
Publicado: (2020)

Evidence-based modeling of combination control on Kenyan youth HIV/AIDS dynamics
por: Ronoh, Marilyn, et al.
Publicado: (2020)

HLA-DM catalytically enhances peptide dissociation by sensing peptide–MHC class II interactions throughout the peptide-binding cleft
por: Reyes-Vargas, Eduardo, et al.
Publicado: (2020)

Regulation of MHC Class II-Peptide Complex Expression by Ubiquitination
por: Cho, Kyung-Jin, et al.
Publicado: (2013)

MHCAttnNet: predicting MHC-peptide bindings for MHC alleles classes I and II using an attention-based deep neural model
por: Venkatesh, Gopalakrishnan, et al.
Publicado: (2020)

Prediction of peptides binding to MHC class I and II alleles by temporal motif mining
por: Meydan, Cem, et al.
Publicado: (2013)

A Missing Switch in Peptide Exchange for MHC Class II Molecules
por: Freund, Christian, et al.
Publicado: (2019)

Proofreading of Peptide—MHC Complexes through Dynamic Multivalent Interactions
por: Thomas, Christoph, et al.
Publicado: (2017)

Multiple-Allele MHC Class II Epitope Engineering by a Molecular Dynamics-Based Evolution Protocol
por: Ochoa, Rodrigo, et al.
Publicado: (2022)

Atheroprotective Vaccination with MHC-II Restricted Peptides from ApoB-100
por: Tse, Kevin, et al.
Publicado: (2013)

The Repertoires of Peptides Presented by MHC-II in the Thymus and in Peripheral Tissue: A Clue for Autoimmunity?
por: Collado, Javier A., et al.
Publicado: (2013)

A Mechanistic Model for Predicting Cell Surface Presentation of Competing Peptides by MHC Class I Molecules
por: Boulanger, Denise S. M., et al.
Publicado: (2018)

Human Intestinal Enteroids Model MHC-II in the Gut Epithelium
por: Wosen, Jonathan E., et al.
Publicado: (2019)

Organizing MHC Class II Presentation
por: Fooksman, David R.
Publicado: (2014)

Modeling the bound conformation of Pemphigus Vulgaris-associated peptides to MHC Class II DR and DQ Alleles
por: Tong, Joo Chuan, et al.
Publicado: (2006)

PANDORA: A Fast, Anchor-Restrained Modelling Protocol for Peptide: MHC Complexes
por: Marzella, Dario F., et al.
Publicado: (2022)

Dynamically Driven Allostery in MHC Proteins: Peptide-Dependent Tuning of Class I MHC Global Flexibility
por: Ayres, Cory M., et al.
Publicado: (2019)

TCR/pMHC Interaction: Phenotypic Model for an Unsolved Enigma
por: Gálvez, Jesús, et al.
Publicado: (2016)

Specific MHC-I Peptides Are Induced Using PROTACs
por: Jensen, Stephanie M., et al.
Publicado: (2018)

Peptide and Peptide-Dependent Motions in MHC Proteins: Immunological Implications and Biophysical Underpinnings
por: Ayres, Cory M., et al.
Publicado: (2017)

Inhibition of HLA-DM Mediated MHC Class II Peptide Loading by HLA-DO Promotes Self Tolerance
por: Denzin, Lisa K.
Publicado: (2013)

Flow Cytometric Clinical Immunomonitoring Using Peptide–MHC Class II Tetramers: Optimization of Methods and Protocol Development
por: Jansen, Diahann T. S. L., et al.
Publicado: (2018)

Comparison of NK alloreactivity prediction models based on KIR-MHC interactions in haematopoietic stem cell transplantation
por: Dhuyser, Adèle, et al.
Publicado: (2023)

Toward a Network Model of MHC Class II-Restricted Antigen Processing
por: Miller, Michael A., et al.
Publicado: (2013)

Are the integrin binding motifs within SARS CoV-2 spike protein and MHC class II alleles playing the key role in COVID-19?
por: Gerencer, Marijan, et al.
Publicado: (2023)

Peptide binding prediction for the human class II MHC allele HLA-DP2: a molecular docking approach
por: Patronov, Atanas, et al.
Publicado: (2011)

On Evaluating MHC-II Binding Peptide Prediction Methods
por: EL-Manzalawy, Yasser, et al.
Publicado: (2008)

Novel Strategies for Malaria Vaccine Design
por: Frimpong, Augustina, et al.
Publicado: (2018)

Effects of Peptide on NK Cell-Mediated MHC I Recognition
por: Cassidy, Sorcha A., et al.
Publicado: (2014)

MHC Class II Polymorphisms, Autoreactive T-Cells, and Autoimmunity
por: Tsai, Sue, et al.
Publicado: (2013)

MHC Class II Auto-Antigen Presentation is Unconventional
por: Sadegh-Nasseri, Scheherazade, et al.
Publicado: (2015)

Re-Directing CD4(+) T Cell Responses with the Flanking Residues of MHC Class II-Bound Peptides: The Core is Not Enough
por: Holland, Christopher J., et al.
Publicado: (2013)

Regulatory T cells targeting a pathogenic MHC class II: Insulin peptide epitope postpone spontaneous autoimmune diabetes
por: Obarorakpor, Nyerhovwo, et al.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_nigt42ngf0ipe58f796vpgv8bb