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Decoding the Heart through Next Generation Sequencing Approaches
Vertebrate organs develop through a complex process which involves interaction between multiple signaling pathways at the molecular, cell, and tissue levels. Heart development is an example of such complex process which, when disrupted, results in congenital heart disease (CHD). This complexity nece...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6027153/ https://www.ncbi.nlm.nih.gov/pubmed/29880785 http://dx.doi.org/10.3390/genes9060289 |
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author | Pawlak, Michal Niescierowicz, Katarzyna Winata, Cecilia Lanny |
author_facet | Pawlak, Michal Niescierowicz, Katarzyna Winata, Cecilia Lanny |
author_sort | Pawlak, Michal |
collection | PubMed |
description | Vertebrate organs develop through a complex process which involves interaction between multiple signaling pathways at the molecular, cell, and tissue levels. Heart development is an example of such complex process which, when disrupted, results in congenital heart disease (CHD). This complexity necessitates a holistic approach which allows the visualization of genome-wide interaction networks, as opposed to assessment of limited subsets of factors. Genomics offers a powerful solution to address the problem of biological complexity by enabling the observation of molecular processes at a genome-wide scale. The emergence of next generation sequencing (NGS) technology has facilitated the expansion of genomics, increasing its output capacity and applicability in various biological disciplines. The application of NGS in various aspects of heart biology has resulted in new discoveries, generating novel insights into this field of study. Here we review the contributions of NGS technology into the understanding of heart development and its disruption reflected in CHD and discuss how emerging NGS based methodologies can contribute to the further understanding of heart repair. |
format | Online Article Text |
id | pubmed-6027153 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-60271532018-07-13 Decoding the Heart through Next Generation Sequencing Approaches Pawlak, Michal Niescierowicz, Katarzyna Winata, Cecilia Lanny Genes (Basel) Review Vertebrate organs develop through a complex process which involves interaction between multiple signaling pathways at the molecular, cell, and tissue levels. Heart development is an example of such complex process which, when disrupted, results in congenital heart disease (CHD). This complexity necessitates a holistic approach which allows the visualization of genome-wide interaction networks, as opposed to assessment of limited subsets of factors. Genomics offers a powerful solution to address the problem of biological complexity by enabling the observation of molecular processes at a genome-wide scale. The emergence of next generation sequencing (NGS) technology has facilitated the expansion of genomics, increasing its output capacity and applicability in various biological disciplines. The application of NGS in various aspects of heart biology has resulted in new discoveries, generating novel insights into this field of study. Here we review the contributions of NGS technology into the understanding of heart development and its disruption reflected in CHD and discuss how emerging NGS based methodologies can contribute to the further understanding of heart repair. MDPI 2018-06-07 /pmc/articles/PMC6027153/ /pubmed/29880785 http://dx.doi.org/10.3390/genes9060289 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Pawlak, Michal Niescierowicz, Katarzyna Winata, Cecilia Lanny Decoding the Heart through Next Generation Sequencing Approaches |
title | Decoding the Heart through Next Generation Sequencing Approaches |
title_full | Decoding the Heart through Next Generation Sequencing Approaches |
title_fullStr | Decoding the Heart through Next Generation Sequencing Approaches |
title_full_unstemmed | Decoding the Heart through Next Generation Sequencing Approaches |
title_short | Decoding the Heart through Next Generation Sequencing Approaches |
title_sort | decoding the heart through next generation sequencing approaches |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6027153/ https://www.ncbi.nlm.nih.gov/pubmed/29880785 http://dx.doi.org/10.3390/genes9060289 |
work_keys_str_mv | AT pawlakmichal decodingtheheartthroughnextgenerationsequencingapproaches AT niescierowiczkatarzyna decodingtheheartthroughnextgenerationsequencingapproaches AT winatacecilialanny decodingtheheartthroughnextgenerationsequencingapproaches |