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The Genome Sequences of 90 Mushrooms

Macrofungus is defined as the fungus that grows an observable sporocarp. The sporocarps of many species are commonly called mushrooms and consumed by people all around the world as food and/or medicine. Most macrofungi belong to the divisions Basidiomycetes and Ascomycetes, which are estimated to co...

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Autores principales: Li, Huiying, Wu, Surui, Ma, Xiao, Chen, Wei, Zhang, Jing, Duan, Shengchang, Gao, Yun, Kui, Ling, Huang, Wenli, Wu, Peng, Shi, Ruoyu, Li, Yifan, Wang, Yuanzhong, Li, Jieqing, Guo, Xiang, Luo, Xiaoli, Li, Qiang, Xiong, Chuan, Liu, Honggao, Gui, Mingying, Sheng, Jun, Dong, Yang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6028375/
https://www.ncbi.nlm.nih.gov/pubmed/29967427
http://dx.doi.org/10.1038/s41598-018-28303-2
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author Li, Huiying
Wu, Surui
Ma, Xiao
Chen, Wei
Zhang, Jing
Duan, Shengchang
Gao, Yun
Kui, Ling
Huang, Wenli
Wu, Peng
Shi, Ruoyu
Li, Yifan
Wang, Yuanzhong
Li, Jieqing
Guo, Xiang
Luo, Xiaoli
Li, Qiang
Xiong, Chuan
Liu, Honggao
Gui, Mingying
Sheng, Jun
Dong, Yang
author_facet Li, Huiying
Wu, Surui
Ma, Xiao
Chen, Wei
Zhang, Jing
Duan, Shengchang
Gao, Yun
Kui, Ling
Huang, Wenli
Wu, Peng
Shi, Ruoyu
Li, Yifan
Wang, Yuanzhong
Li, Jieqing
Guo, Xiang
Luo, Xiaoli
Li, Qiang
Xiong, Chuan
Liu, Honggao
Gui, Mingying
Sheng, Jun
Dong, Yang
author_sort Li, Huiying
collection PubMed
description Macrofungus is defined as the fungus that grows an observable sporocarp. The sporocarps of many species are commonly called mushrooms and consumed by people all around the world as food and/or medicine. Most macrofungi belong to the divisions Basidiomycetes and Ascomycetes, which are estimated to contain more than 80,000 species in total. We report the draft genome assemblies of macrofungi (83 Basidiomycetes species and 7 Ascomycetes species) based on Illumina sequencing. The genome sizes of these species ranged from 27.4 Mb (Hygrophorus russula) to 202.2 MB (Chroogomphus rutilus). The numbers of protein-coding genes were predicted in the range of 9,511 (Hygrophorus russula) to 52,289 (Craterellus lutescens). This study provides the largest genomic dataset for macrofungi species. This resource will facilitate the artificial cultivation of edible mushrooms and the discovery of novel drug candidates.
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spelling pubmed-60283752018-07-09 The Genome Sequences of 90 Mushrooms Li, Huiying Wu, Surui Ma, Xiao Chen, Wei Zhang, Jing Duan, Shengchang Gao, Yun Kui, Ling Huang, Wenli Wu, Peng Shi, Ruoyu Li, Yifan Wang, Yuanzhong Li, Jieqing Guo, Xiang Luo, Xiaoli Li, Qiang Xiong, Chuan Liu, Honggao Gui, Mingying Sheng, Jun Dong, Yang Sci Rep Article Macrofungus is defined as the fungus that grows an observable sporocarp. The sporocarps of many species are commonly called mushrooms and consumed by people all around the world as food and/or medicine. Most macrofungi belong to the divisions Basidiomycetes and Ascomycetes, which are estimated to contain more than 80,000 species in total. We report the draft genome assemblies of macrofungi (83 Basidiomycetes species and 7 Ascomycetes species) based on Illumina sequencing. The genome sizes of these species ranged from 27.4 Mb (Hygrophorus russula) to 202.2 MB (Chroogomphus rutilus). The numbers of protein-coding genes were predicted in the range of 9,511 (Hygrophorus russula) to 52,289 (Craterellus lutescens). This study provides the largest genomic dataset for macrofungi species. This resource will facilitate the artificial cultivation of edible mushrooms and the discovery of novel drug candidates. Nature Publishing Group UK 2018-07-02 /pmc/articles/PMC6028375/ /pubmed/29967427 http://dx.doi.org/10.1038/s41598-018-28303-2 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Li, Huiying
Wu, Surui
Ma, Xiao
Chen, Wei
Zhang, Jing
Duan, Shengchang
Gao, Yun
Kui, Ling
Huang, Wenli
Wu, Peng
Shi, Ruoyu
Li, Yifan
Wang, Yuanzhong
Li, Jieqing
Guo, Xiang
Luo, Xiaoli
Li, Qiang
Xiong, Chuan
Liu, Honggao
Gui, Mingying
Sheng, Jun
Dong, Yang
The Genome Sequences of 90 Mushrooms
title The Genome Sequences of 90 Mushrooms
title_full The Genome Sequences of 90 Mushrooms
title_fullStr The Genome Sequences of 90 Mushrooms
title_full_unstemmed The Genome Sequences of 90 Mushrooms
title_short The Genome Sequences of 90 Mushrooms
title_sort genome sequences of 90 mushrooms
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6028375/
https://www.ncbi.nlm.nih.gov/pubmed/29967427
http://dx.doi.org/10.1038/s41598-018-28303-2
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