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The Genome Sequences of 90 Mushrooms
Macrofungus is defined as the fungus that grows an observable sporocarp. The sporocarps of many species are commonly called mushrooms and consumed by people all around the world as food and/or medicine. Most macrofungi belong to the divisions Basidiomycetes and Ascomycetes, which are estimated to co...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6028375/ https://www.ncbi.nlm.nih.gov/pubmed/29967427 http://dx.doi.org/10.1038/s41598-018-28303-2 |
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author | Li, Huiying Wu, Surui Ma, Xiao Chen, Wei Zhang, Jing Duan, Shengchang Gao, Yun Kui, Ling Huang, Wenli Wu, Peng Shi, Ruoyu Li, Yifan Wang, Yuanzhong Li, Jieqing Guo, Xiang Luo, Xiaoli Li, Qiang Xiong, Chuan Liu, Honggao Gui, Mingying Sheng, Jun Dong, Yang |
author_facet | Li, Huiying Wu, Surui Ma, Xiao Chen, Wei Zhang, Jing Duan, Shengchang Gao, Yun Kui, Ling Huang, Wenli Wu, Peng Shi, Ruoyu Li, Yifan Wang, Yuanzhong Li, Jieqing Guo, Xiang Luo, Xiaoli Li, Qiang Xiong, Chuan Liu, Honggao Gui, Mingying Sheng, Jun Dong, Yang |
author_sort | Li, Huiying |
collection | PubMed |
description | Macrofungus is defined as the fungus that grows an observable sporocarp. The sporocarps of many species are commonly called mushrooms and consumed by people all around the world as food and/or medicine. Most macrofungi belong to the divisions Basidiomycetes and Ascomycetes, which are estimated to contain more than 80,000 species in total. We report the draft genome assemblies of macrofungi (83 Basidiomycetes species and 7 Ascomycetes species) based on Illumina sequencing. The genome sizes of these species ranged from 27.4 Mb (Hygrophorus russula) to 202.2 MB (Chroogomphus rutilus). The numbers of protein-coding genes were predicted in the range of 9,511 (Hygrophorus russula) to 52,289 (Craterellus lutescens). This study provides the largest genomic dataset for macrofungi species. This resource will facilitate the artificial cultivation of edible mushrooms and the discovery of novel drug candidates. |
format | Online Article Text |
id | pubmed-6028375 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-60283752018-07-09 The Genome Sequences of 90 Mushrooms Li, Huiying Wu, Surui Ma, Xiao Chen, Wei Zhang, Jing Duan, Shengchang Gao, Yun Kui, Ling Huang, Wenli Wu, Peng Shi, Ruoyu Li, Yifan Wang, Yuanzhong Li, Jieqing Guo, Xiang Luo, Xiaoli Li, Qiang Xiong, Chuan Liu, Honggao Gui, Mingying Sheng, Jun Dong, Yang Sci Rep Article Macrofungus is defined as the fungus that grows an observable sporocarp. The sporocarps of many species are commonly called mushrooms and consumed by people all around the world as food and/or medicine. Most macrofungi belong to the divisions Basidiomycetes and Ascomycetes, which are estimated to contain more than 80,000 species in total. We report the draft genome assemblies of macrofungi (83 Basidiomycetes species and 7 Ascomycetes species) based on Illumina sequencing. The genome sizes of these species ranged from 27.4 Mb (Hygrophorus russula) to 202.2 MB (Chroogomphus rutilus). The numbers of protein-coding genes were predicted in the range of 9,511 (Hygrophorus russula) to 52,289 (Craterellus lutescens). This study provides the largest genomic dataset for macrofungi species. This resource will facilitate the artificial cultivation of edible mushrooms and the discovery of novel drug candidates. Nature Publishing Group UK 2018-07-02 /pmc/articles/PMC6028375/ /pubmed/29967427 http://dx.doi.org/10.1038/s41598-018-28303-2 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Li, Huiying Wu, Surui Ma, Xiao Chen, Wei Zhang, Jing Duan, Shengchang Gao, Yun Kui, Ling Huang, Wenli Wu, Peng Shi, Ruoyu Li, Yifan Wang, Yuanzhong Li, Jieqing Guo, Xiang Luo, Xiaoli Li, Qiang Xiong, Chuan Liu, Honggao Gui, Mingying Sheng, Jun Dong, Yang The Genome Sequences of 90 Mushrooms |
title | The Genome Sequences of 90 Mushrooms |
title_full | The Genome Sequences of 90 Mushrooms |
title_fullStr | The Genome Sequences of 90 Mushrooms |
title_full_unstemmed | The Genome Sequences of 90 Mushrooms |
title_short | The Genome Sequences of 90 Mushrooms |
title_sort | genome sequences of 90 mushrooms |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6028375/ https://www.ncbi.nlm.nih.gov/pubmed/29967427 http://dx.doi.org/10.1038/s41598-018-28303-2 |
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