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ChemDIS-Mixture: an online tool for analyzing potential interaction effects of chemical mixtures

The assessment of bioactivity and toxicity for mixtures remains a challenging work. Although several computational models have been developed to accelerate the evaluation of chemical-chemical interaction, a specific biological endpoint should be defined before applying the models that usually relies...

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Autores principales: Tung, Chun-Wei, Wang, Chia-Chi, Wang, Shan-Shan, Lin, Pinpin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6030136/
https://www.ncbi.nlm.nih.gov/pubmed/29968796
http://dx.doi.org/10.1038/s41598-018-28361-6
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author Tung, Chun-Wei
Wang, Chia-Chi
Wang, Shan-Shan
Lin, Pinpin
author_facet Tung, Chun-Wei
Wang, Chia-Chi
Wang, Shan-Shan
Lin, Pinpin
author_sort Tung, Chun-Wei
collection PubMed
description The assessment of bioactivity and toxicity for mixtures remains a challenging work. Although several computational models have been developed to accelerate the evaluation of chemical-chemical interaction, a specific biological endpoint should be defined before applying the models that usually relies on clinical and experimental data. The development of computational methods is desirable for identifying potential biological endpoints of mixture interactions. To facilitate the identification of potential effects of mixture interactions, a novel online system named ChemDIS-Mixture is proposed to analyze the shared target proteins, and common enriched functions, pathways, and diseases affected by multiple chemicals. Venn diagram tools have been implemented for easy analysis and visualization of interaction targets and effects. Case studies have been provided to demonstrate the capability of ChemDIS-Mixture for identifying potential effects of mixture interactions in clinical studies. ChemDIS-Mixture provides useful functions for the identification of potential effects of coexposure to multiple chemicals. ChemDIS-Mixture is freely accessible at http://cwtung.kmu.edu.tw/chemdis/mixture.
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spelling pubmed-60301362018-07-11 ChemDIS-Mixture: an online tool for analyzing potential interaction effects of chemical mixtures Tung, Chun-Wei Wang, Chia-Chi Wang, Shan-Shan Lin, Pinpin Sci Rep Article The assessment of bioactivity and toxicity for mixtures remains a challenging work. Although several computational models have been developed to accelerate the evaluation of chemical-chemical interaction, a specific biological endpoint should be defined before applying the models that usually relies on clinical and experimental data. The development of computational methods is desirable for identifying potential biological endpoints of mixture interactions. To facilitate the identification of potential effects of mixture interactions, a novel online system named ChemDIS-Mixture is proposed to analyze the shared target proteins, and common enriched functions, pathways, and diseases affected by multiple chemicals. Venn diagram tools have been implemented for easy analysis and visualization of interaction targets and effects. Case studies have been provided to demonstrate the capability of ChemDIS-Mixture for identifying potential effects of mixture interactions in clinical studies. ChemDIS-Mixture provides useful functions for the identification of potential effects of coexposure to multiple chemicals. ChemDIS-Mixture is freely accessible at http://cwtung.kmu.edu.tw/chemdis/mixture. Nature Publishing Group UK 2018-07-03 /pmc/articles/PMC6030136/ /pubmed/29968796 http://dx.doi.org/10.1038/s41598-018-28361-6 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Tung, Chun-Wei
Wang, Chia-Chi
Wang, Shan-Shan
Lin, Pinpin
ChemDIS-Mixture: an online tool for analyzing potential interaction effects of chemical mixtures
title ChemDIS-Mixture: an online tool for analyzing potential interaction effects of chemical mixtures
title_full ChemDIS-Mixture: an online tool for analyzing potential interaction effects of chemical mixtures
title_fullStr ChemDIS-Mixture: an online tool for analyzing potential interaction effects of chemical mixtures
title_full_unstemmed ChemDIS-Mixture: an online tool for analyzing potential interaction effects of chemical mixtures
title_short ChemDIS-Mixture: an online tool for analyzing potential interaction effects of chemical mixtures
title_sort chemdis-mixture: an online tool for analyzing potential interaction effects of chemical mixtures
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6030136/
https://www.ncbi.nlm.nih.gov/pubmed/29968796
http://dx.doi.org/10.1038/s41598-018-28361-6
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