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Image set for deep learning: field images of maize annotated with disease symptoms

OBJECTIVES: Automated detection and quantification of plant diseases would enable more rapid gains in plant breeding and faster scouting of farmers’ fields. However, it is difficult for a simple algorithm to distinguish between the target disease and other sources of dead plant tissue in a typical f...

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Autores principales: Wiesner-Hanks, Tyr, Stewart, Ethan L., Kaczmar, Nicholas, DeChant, Chad, Wu, Harvey, Nelson, Rebecca J., Lipson, Hod, Gore, Michael A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6030791/
https://www.ncbi.nlm.nih.gov/pubmed/29970178
http://dx.doi.org/10.1186/s13104-018-3548-6
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author Wiesner-Hanks, Tyr
Stewart, Ethan L.
Kaczmar, Nicholas
DeChant, Chad
Wu, Harvey
Nelson, Rebecca J.
Lipson, Hod
Gore, Michael A.
author_facet Wiesner-Hanks, Tyr
Stewart, Ethan L.
Kaczmar, Nicholas
DeChant, Chad
Wu, Harvey
Nelson, Rebecca J.
Lipson, Hod
Gore, Michael A.
author_sort Wiesner-Hanks, Tyr
collection PubMed
description OBJECTIVES: Automated detection and quantification of plant diseases would enable more rapid gains in plant breeding and faster scouting of farmers’ fields. However, it is difficult for a simple algorithm to distinguish between the target disease and other sources of dead plant tissue in a typical field, especially given the many variations in lighting and orientation. Training a machine learning algorithm to accurately detect a given disease from images taken in the field requires a massive amount of human-generated training data. DATA DESCRIPTION: This data set contains images of maize (Zea mays L.) leaves taken in three ways: by a hand-held camera, with a camera mounted on a boom, and with a camera mounted on a small unmanned aircraft system (sUAS, commonly known as a drone). Lesions of northern leaf blight (NLB), a common foliar disease of maize, were annotated in each image by one of two human experts. The three data sets together contain 18,222 images annotated with 105,705 NLB lesions, making this the largest publicly available image set annotated for a single plant disease.
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spelling pubmed-60307912018-07-09 Image set for deep learning: field images of maize annotated with disease symptoms Wiesner-Hanks, Tyr Stewart, Ethan L. Kaczmar, Nicholas DeChant, Chad Wu, Harvey Nelson, Rebecca J. Lipson, Hod Gore, Michael A. BMC Res Notes Data Note OBJECTIVES: Automated detection and quantification of plant diseases would enable more rapid gains in plant breeding and faster scouting of farmers’ fields. However, it is difficult for a simple algorithm to distinguish between the target disease and other sources of dead plant tissue in a typical field, especially given the many variations in lighting and orientation. Training a machine learning algorithm to accurately detect a given disease from images taken in the field requires a massive amount of human-generated training data. DATA DESCRIPTION: This data set contains images of maize (Zea mays L.) leaves taken in three ways: by a hand-held camera, with a camera mounted on a boom, and with a camera mounted on a small unmanned aircraft system (sUAS, commonly known as a drone). Lesions of northern leaf blight (NLB), a common foliar disease of maize, were annotated in each image by one of two human experts. The three data sets together contain 18,222 images annotated with 105,705 NLB lesions, making this the largest publicly available image set annotated for a single plant disease. BioMed Central 2018-07-03 /pmc/articles/PMC6030791/ /pubmed/29970178 http://dx.doi.org/10.1186/s13104-018-3548-6 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Data Note
Wiesner-Hanks, Tyr
Stewart, Ethan L.
Kaczmar, Nicholas
DeChant, Chad
Wu, Harvey
Nelson, Rebecca J.
Lipson, Hod
Gore, Michael A.
Image set for deep learning: field images of maize annotated with disease symptoms
title Image set for deep learning: field images of maize annotated with disease symptoms
title_full Image set for deep learning: field images of maize annotated with disease symptoms
title_fullStr Image set for deep learning: field images of maize annotated with disease symptoms
title_full_unstemmed Image set for deep learning: field images of maize annotated with disease symptoms
title_short Image set for deep learning: field images of maize annotated with disease symptoms
title_sort image set for deep learning: field images of maize annotated with disease symptoms
topic Data Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6030791/
https://www.ncbi.nlm.nih.gov/pubmed/29970178
http://dx.doi.org/10.1186/s13104-018-3548-6
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