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mORCA: sailing bioinformatics world with mobile devices

MOTIVATION: Nearly 10 years have passed since the first mobile apps appeared. Given the fact that bioinformatics is a web-based world and that mobile devices are endowed with web-browsers, it seemed natural that bioinformatics would transit from personal computers to mobile devices but nothing could...

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Autores principales: Díaz-del-Pino, Sergio, Falgueras, Juan, Perez-Wohlfeil, Esteban, Trelles, Oswaldo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6031017/
https://www.ncbi.nlm.nih.gov/pubmed/29069310
http://dx.doi.org/10.1093/bioinformatics/btx673
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author Díaz-del-Pino, Sergio
Falgueras, Juan
Perez-Wohlfeil, Esteban
Trelles, Oswaldo
author_facet Díaz-del-Pino, Sergio
Falgueras, Juan
Perez-Wohlfeil, Esteban
Trelles, Oswaldo
author_sort Díaz-del-Pino, Sergio
collection PubMed
description MOTIVATION: Nearly 10 years have passed since the first mobile apps appeared. Given the fact that bioinformatics is a web-based world and that mobile devices are endowed with web-browsers, it seemed natural that bioinformatics would transit from personal computers to mobile devices but nothing could be further from the truth. The transition demands new paradigms, designs and novel implementations. RESULTS: Throughout an in-depth analysis of requirements of existing bioinformatics applications we designed and deployed an easy-to-use web-based lightweight mobile client. Such client is able to browse, select, compose automatically interface parameters, invoke services and monitor the execution of Web Services using the service's metadata stored in catalogs or repositories. AVAILABILITY AND IMPLEMENTATION: mORCA is available at http://bitlab-es.com/morca/app as a web-app. It is also available in the App store by Apple and Play Store by Google. The software will be available for at least 2 years. SUPPLEMENTARY INFORMATION: Source code, final web-app, training material and documentation is available at http://bitlab-es.com/morca
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spelling pubmed-60310172018-07-10 mORCA: sailing bioinformatics world with mobile devices Díaz-del-Pino, Sergio Falgueras, Juan Perez-Wohlfeil, Esteban Trelles, Oswaldo Bioinformatics Applications Notes MOTIVATION: Nearly 10 years have passed since the first mobile apps appeared. Given the fact that bioinformatics is a web-based world and that mobile devices are endowed with web-browsers, it seemed natural that bioinformatics would transit from personal computers to mobile devices but nothing could be further from the truth. The transition demands new paradigms, designs and novel implementations. RESULTS: Throughout an in-depth analysis of requirements of existing bioinformatics applications we designed and deployed an easy-to-use web-based lightweight mobile client. Such client is able to browse, select, compose automatically interface parameters, invoke services and monitor the execution of Web Services using the service's metadata stored in catalogs or repositories. AVAILABILITY AND IMPLEMENTATION: mORCA is available at http://bitlab-es.com/morca/app as a web-app. It is also available in the App store by Apple and Play Store by Google. The software will be available for at least 2 years. SUPPLEMENTARY INFORMATION: Source code, final web-app, training material and documentation is available at http://bitlab-es.com/morca Oxford University Press 2018-03-01 2017-10-24 /pmc/articles/PMC6031017/ /pubmed/29069310 http://dx.doi.org/10.1093/bioinformatics/btx673 Text en © The Author 2017. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Applications Notes
Díaz-del-Pino, Sergio
Falgueras, Juan
Perez-Wohlfeil, Esteban
Trelles, Oswaldo
mORCA: sailing bioinformatics world with mobile devices
title mORCA: sailing bioinformatics world with mobile devices
title_full mORCA: sailing bioinformatics world with mobile devices
title_fullStr mORCA: sailing bioinformatics world with mobile devices
title_full_unstemmed mORCA: sailing bioinformatics world with mobile devices
title_short mORCA: sailing bioinformatics world with mobile devices
title_sort morca: sailing bioinformatics world with mobile devices
topic Applications Notes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6031017/
https://www.ncbi.nlm.nih.gov/pubmed/29069310
http://dx.doi.org/10.1093/bioinformatics/btx673
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