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Quantitative Extra Long PCR to Detect DNA Lesions in Patients Exposed to Low Doses of Diagnostic Radiation

BACKGROUND: Radiation causes oxidative lesions and strand breaks in DNA of exposed cells. Extended length PCR is a reliable method for assessing DNA damage. Longer DNA strands with DNA damage are difficult to amplify compared to smaller DNA strands by PCR. The present study was aimed to evaluate DNA...

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Autores principales: Khan, Kainat, Tewari, Shikha, Rastogi, Madhup, Agarwal, Gaurav Raj, Mishra, Surendra Prasad, Husain, Nuzhat
Formato: Online Artículo Texto
Lenguaje:English
Publicado: West Asia Organization for Cancer Prevention 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6031809/
https://www.ncbi.nlm.nih.gov/pubmed/29802702
http://dx.doi.org/10.22034/APJCP.2018.19.5.1367
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author Khan, Kainat
Tewari, Shikha
Rastogi, Madhup
Agarwal, Gaurav Raj
Mishra, Surendra Prasad
Husain, Nuzhat
author_facet Khan, Kainat
Tewari, Shikha
Rastogi, Madhup
Agarwal, Gaurav Raj
Mishra, Surendra Prasad
Husain, Nuzhat
author_sort Khan, Kainat
collection PubMed
description BACKGROUND: Radiation causes oxidative lesions and strand breaks in DNA of exposed cells. Extended length PCR is a reliable method for assessing DNA damage. Longer DNA strands with DNA damage are difficult to amplify compared to smaller DNA strands by PCR. The present study was aimed to evaluate DNA damage caused by ionising radiation exposure in therapeutic and diagnostic medicine. MATERIALS AND METHODS: The study group comprised 50 cases with low dose single exposure (LDS), low dose multiple exposure (LDM) and low dose angiography (LDA) which were compared with 25 high dose controls (HDC) and 25 controls with no exposure (NEC). Blood samples were collected within 1 hour of radiation exposure. DNA was isolated using a kit based protocol, 50 ng aliquots of DNA were used to amplify a long 13kbp DNA fragment of the β-actin gene by conventional PCR and band intensity was then quantified. Relative amplification was calculated and damage was expressed in terms of lesions per kilobase (kbp) by assuming a Poisson distribution. RESULT: Relative amplification was found to be 1.0, 0.87, 0.86, 0.72 and 0.69 with NEC, LDS, LDM, LDA and HDC groups, respectively. Cases undergoing angiography as well as high dose controls had high values, compared to NEC. The lesions/kbp calculated for LDS was 0.13, for LDM 0.15, for LDA 0.32 and for HDC 0.37 suggesting a linear increase in quantity with increasing radiation dose. CONCLUSION: DNA damage, even at low doses of radiation can be assessed by quantitative extra long PCR.
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spelling pubmed-60318092018-07-11 Quantitative Extra Long PCR to Detect DNA Lesions in Patients Exposed to Low Doses of Diagnostic Radiation Khan, Kainat Tewari, Shikha Rastogi, Madhup Agarwal, Gaurav Raj Mishra, Surendra Prasad Husain, Nuzhat Asian Pac J Cancer Prev Research Article BACKGROUND: Radiation causes oxidative lesions and strand breaks in DNA of exposed cells. Extended length PCR is a reliable method for assessing DNA damage. Longer DNA strands with DNA damage are difficult to amplify compared to smaller DNA strands by PCR. The present study was aimed to evaluate DNA damage caused by ionising radiation exposure in therapeutic and diagnostic medicine. MATERIALS AND METHODS: The study group comprised 50 cases with low dose single exposure (LDS), low dose multiple exposure (LDM) and low dose angiography (LDA) which were compared with 25 high dose controls (HDC) and 25 controls with no exposure (NEC). Blood samples were collected within 1 hour of radiation exposure. DNA was isolated using a kit based protocol, 50 ng aliquots of DNA were used to amplify a long 13kbp DNA fragment of the β-actin gene by conventional PCR and band intensity was then quantified. Relative amplification was calculated and damage was expressed in terms of lesions per kilobase (kbp) by assuming a Poisson distribution. RESULT: Relative amplification was found to be 1.0, 0.87, 0.86, 0.72 and 0.69 with NEC, LDS, LDM, LDA and HDC groups, respectively. Cases undergoing angiography as well as high dose controls had high values, compared to NEC. The lesions/kbp calculated for LDS was 0.13, for LDM 0.15, for LDA 0.32 and for HDC 0.37 suggesting a linear increase in quantity with increasing radiation dose. CONCLUSION: DNA damage, even at low doses of radiation can be assessed by quantitative extra long PCR. West Asia Organization for Cancer Prevention 2018 /pmc/articles/PMC6031809/ /pubmed/29802702 http://dx.doi.org/10.22034/APJCP.2018.19.5.1367 Text en Copyright: © Asian Pacific Journal of Cancer Prevention http://creativecommons.org/licenses/BY-SA/4.0 This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License
spellingShingle Research Article
Khan, Kainat
Tewari, Shikha
Rastogi, Madhup
Agarwal, Gaurav Raj
Mishra, Surendra Prasad
Husain, Nuzhat
Quantitative Extra Long PCR to Detect DNA Lesions in Patients Exposed to Low Doses of Diagnostic Radiation
title Quantitative Extra Long PCR to Detect DNA Lesions in Patients Exposed to Low Doses of Diagnostic Radiation
title_full Quantitative Extra Long PCR to Detect DNA Lesions in Patients Exposed to Low Doses of Diagnostic Radiation
title_fullStr Quantitative Extra Long PCR to Detect DNA Lesions in Patients Exposed to Low Doses of Diagnostic Radiation
title_full_unstemmed Quantitative Extra Long PCR to Detect DNA Lesions in Patients Exposed to Low Doses of Diagnostic Radiation
title_short Quantitative Extra Long PCR to Detect DNA Lesions in Patients Exposed to Low Doses of Diagnostic Radiation
title_sort quantitative extra long pcr to detect dna lesions in patients exposed to low doses of diagnostic radiation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6031809/
https://www.ncbi.nlm.nih.gov/pubmed/29802702
http://dx.doi.org/10.22034/APJCP.2018.19.5.1367
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