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TLR10 and NFKBIA contributed to the risk of hip osteoarthritis: systematic evaluation based on Han Chinese population

Multiple lines of evidence have confirmed the importance of genetic factors for hip osteoarthritis (HOA). Our study aimed to investigate the associations of TLR10 and NFKBIA with respect to the HOA risk in Han Chinese individuals. A total of 1,043 HOA patients and 2,664 controls were recruited. Then...

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Autores principales: Tang, Hongtao, Cheng, Zhenzhen, Ma, Wenlong, Liu, Youwen, Tong, Zhaofang, Sun, Ruibo, Liu, Hongliang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6035240/
https://www.ncbi.nlm.nih.gov/pubmed/29980729
http://dx.doi.org/10.1038/s41598-018-28597-2
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author Tang, Hongtao
Cheng, Zhenzhen
Ma, Wenlong
Liu, Youwen
Tong, Zhaofang
Sun, Ruibo
Liu, Hongliang
author_facet Tang, Hongtao
Cheng, Zhenzhen
Ma, Wenlong
Liu, Youwen
Tong, Zhaofang
Sun, Ruibo
Liu, Hongliang
author_sort Tang, Hongtao
collection PubMed
description Multiple lines of evidence have confirmed the importance of genetic factors for hip osteoarthritis (HOA). Our study aimed to investigate the associations of TLR10 and NFKBIA with respect to the HOA risk in Han Chinese individuals. A total of 1,043 HOA patients and 2,664 controls were recruited. Then, 23 tag single-nucleotide polymorphisms (SNPs) in the TLR10 and NFKBIA genes were selected for genotyping. Genetic association analyses were conducted in both single-marker and haplotype-based ways. Gene by gene, two-way interactions were analysed using a case-only method. Multiple bioinformatics tools were utilised to examine the potential functional significance of the SNPs. Two significant SNPs, rs11096957 (OR = 1.26, P = 1.35 × 10(−5)) and rs2273650 (OR = 1.2, P = 1.57 × 10(−3)), were significantly associated with HOA risk. Rs11096957 was also associated with the severity of the HOA. Bioinformatics analysis indicated that the allele T of rs2273650 would create new miRNA/SNP target duplexes, which suggests that rs2273650 could alter the NFKBIA expression by affecting the miRNA/SNP target duplexes. Our study identified significant association signals from NFKBIA with HOA for the first time, and it also confirmed the contribution of TLR10 to the HOA risk. These findings would provide clues for identifying individuals at high risk of HOA.
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spelling pubmed-60352402018-07-12 TLR10 and NFKBIA contributed to the risk of hip osteoarthritis: systematic evaluation based on Han Chinese population Tang, Hongtao Cheng, Zhenzhen Ma, Wenlong Liu, Youwen Tong, Zhaofang Sun, Ruibo Liu, Hongliang Sci Rep Article Multiple lines of evidence have confirmed the importance of genetic factors for hip osteoarthritis (HOA). Our study aimed to investigate the associations of TLR10 and NFKBIA with respect to the HOA risk in Han Chinese individuals. A total of 1,043 HOA patients and 2,664 controls were recruited. Then, 23 tag single-nucleotide polymorphisms (SNPs) in the TLR10 and NFKBIA genes were selected for genotyping. Genetic association analyses were conducted in both single-marker and haplotype-based ways. Gene by gene, two-way interactions were analysed using a case-only method. Multiple bioinformatics tools were utilised to examine the potential functional significance of the SNPs. Two significant SNPs, rs11096957 (OR = 1.26, P = 1.35 × 10(−5)) and rs2273650 (OR = 1.2, P = 1.57 × 10(−3)), were significantly associated with HOA risk. Rs11096957 was also associated with the severity of the HOA. Bioinformatics analysis indicated that the allele T of rs2273650 would create new miRNA/SNP target duplexes, which suggests that rs2273650 could alter the NFKBIA expression by affecting the miRNA/SNP target duplexes. Our study identified significant association signals from NFKBIA with HOA for the first time, and it also confirmed the contribution of TLR10 to the HOA risk. These findings would provide clues for identifying individuals at high risk of HOA. Nature Publishing Group UK 2018-07-06 /pmc/articles/PMC6035240/ /pubmed/29980729 http://dx.doi.org/10.1038/s41598-018-28597-2 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Tang, Hongtao
Cheng, Zhenzhen
Ma, Wenlong
Liu, Youwen
Tong, Zhaofang
Sun, Ruibo
Liu, Hongliang
TLR10 and NFKBIA contributed to the risk of hip osteoarthritis: systematic evaluation based on Han Chinese population
title TLR10 and NFKBIA contributed to the risk of hip osteoarthritis: systematic evaluation based on Han Chinese population
title_full TLR10 and NFKBIA contributed to the risk of hip osteoarthritis: systematic evaluation based on Han Chinese population
title_fullStr TLR10 and NFKBIA contributed to the risk of hip osteoarthritis: systematic evaluation based on Han Chinese population
title_full_unstemmed TLR10 and NFKBIA contributed to the risk of hip osteoarthritis: systematic evaluation based on Han Chinese population
title_short TLR10 and NFKBIA contributed to the risk of hip osteoarthritis: systematic evaluation based on Han Chinese population
title_sort tlr10 and nfkbia contributed to the risk of hip osteoarthritis: systematic evaluation based on han chinese population
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6035240/
https://www.ncbi.nlm.nih.gov/pubmed/29980729
http://dx.doi.org/10.1038/s41598-018-28597-2
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