Cargando…

Automatic analysis of treadmill running to estimate times to fatigue and exhaustion in rodents

INTRODUCTION: The determination of fatigue and exhaustion in experimental animals is complicated by the subjective nature of the measurement. Typically, it requires an observer to watch exercising animals, e.g. rats running on the treadmill, and to identify the time of the event. In this study, we h...

Descripción completa

Detalles Bibliográficos
Autores principales: Zaretsky, Dmitry V., Kline, Hannah, Zaretskaia, Maria V., Rusyniak, Daniel E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6037152/
https://www.ncbi.nlm.nih.gov/pubmed/30002953
http://dx.doi.org/10.7717/peerj.5017
_version_ 1783338289552424960
author Zaretsky, Dmitry V.
Kline, Hannah
Zaretskaia, Maria V.
Rusyniak, Daniel E.
author_facet Zaretsky, Dmitry V.
Kline, Hannah
Zaretskaia, Maria V.
Rusyniak, Daniel E.
author_sort Zaretsky, Dmitry V.
collection PubMed
description INTRODUCTION: The determination of fatigue and exhaustion in experimental animals is complicated by the subjective nature of the measurement. Typically, it requires an observer to watch exercising animals, e.g. rats running on the treadmill, and to identify the time of the event. In this study, we hypothesized that automatic analysis of the time-averaged position of a rat on a treadmill could be an objective way for estimating times to fatigue and exhaustion. To test this hypothesis, we compared these times measured by a human observer to the results of an automated video tracking system. METHODS: Rats, previously familiarized to running on the treadmill, ran at a fixed speed with zero incline, until exhaustion. The experiments were performed at either room temperature (24 °C) or in a hot environment (32 °C). Each experiment was video recorded. A trained observer estimated the times to fatigue and exhaustion. Then, video tracking software was used to determine the position of the animals on the treadmill belt. The times to fatigue and exhaustion were determined, based on the position on the treadmill using predefined criteria. RESULTS: Manual scores and the average position on the treadmill had significant correlation. Both the observer and the automated video tracking determined that exercise in a hot environment, compared with the exercise at room temperature, results in shorter times to exhaustion and fatigue. Also, estimates of times made by the observer and the automated video tracking were not statistically different from each other. DISCUSSION: A similarity between the estimates of times to fatigue and exhaustion made by the observer and the automated technique suggests that video tracking of rodents running on a treadmill can be used to determine both parameters in experimental studies. Video tracking technique allows for a more objective measure and would allow for an increased performance in experimentation. The Supplemental information to this manuscript contains an Excel file, which includes the code in Virtual Basic with freeware license, to process and visualize running data and automatically estimate the times to fatigue and exhaustion. Instructions for the software are also included.
format Online
Article
Text
id pubmed-6037152
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher PeerJ Inc.
record_format MEDLINE/PubMed
spelling pubmed-60371522018-07-12 Automatic analysis of treadmill running to estimate times to fatigue and exhaustion in rodents Zaretsky, Dmitry V. Kline, Hannah Zaretskaia, Maria V. Rusyniak, Daniel E. PeerJ Animal Behavior INTRODUCTION: The determination of fatigue and exhaustion in experimental animals is complicated by the subjective nature of the measurement. Typically, it requires an observer to watch exercising animals, e.g. rats running on the treadmill, and to identify the time of the event. In this study, we hypothesized that automatic analysis of the time-averaged position of a rat on a treadmill could be an objective way for estimating times to fatigue and exhaustion. To test this hypothesis, we compared these times measured by a human observer to the results of an automated video tracking system. METHODS: Rats, previously familiarized to running on the treadmill, ran at a fixed speed with zero incline, until exhaustion. The experiments were performed at either room temperature (24 °C) or in a hot environment (32 °C). Each experiment was video recorded. A trained observer estimated the times to fatigue and exhaustion. Then, video tracking software was used to determine the position of the animals on the treadmill belt. The times to fatigue and exhaustion were determined, based on the position on the treadmill using predefined criteria. RESULTS: Manual scores and the average position on the treadmill had significant correlation. Both the observer and the automated video tracking determined that exercise in a hot environment, compared with the exercise at room temperature, results in shorter times to exhaustion and fatigue. Also, estimates of times made by the observer and the automated video tracking were not statistically different from each other. DISCUSSION: A similarity between the estimates of times to fatigue and exhaustion made by the observer and the automated technique suggests that video tracking of rodents running on a treadmill can be used to determine both parameters in experimental studies. Video tracking technique allows for a more objective measure and would allow for an increased performance in experimentation. The Supplemental information to this manuscript contains an Excel file, which includes the code in Virtual Basic with freeware license, to process and visualize running data and automatically estimate the times to fatigue and exhaustion. Instructions for the software are also included. PeerJ Inc. 2018-07-06 /pmc/articles/PMC6037152/ /pubmed/30002953 http://dx.doi.org/10.7717/peerj.5017 Text en ©2018 Zaretsky et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Animal Behavior
Zaretsky, Dmitry V.
Kline, Hannah
Zaretskaia, Maria V.
Rusyniak, Daniel E.
Automatic analysis of treadmill running to estimate times to fatigue and exhaustion in rodents
title Automatic analysis of treadmill running to estimate times to fatigue and exhaustion in rodents
title_full Automatic analysis of treadmill running to estimate times to fatigue and exhaustion in rodents
title_fullStr Automatic analysis of treadmill running to estimate times to fatigue and exhaustion in rodents
title_full_unstemmed Automatic analysis of treadmill running to estimate times to fatigue and exhaustion in rodents
title_short Automatic analysis of treadmill running to estimate times to fatigue and exhaustion in rodents
title_sort automatic analysis of treadmill running to estimate times to fatigue and exhaustion in rodents
topic Animal Behavior
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6037152/
https://www.ncbi.nlm.nih.gov/pubmed/30002953
http://dx.doi.org/10.7717/peerj.5017
work_keys_str_mv AT zaretskydmitryv automaticanalysisoftreadmillrunningtoestimatetimestofatigueandexhaustioninrodents
AT klinehannah automaticanalysisoftreadmillrunningtoestimatetimestofatigueandexhaustioninrodents
AT zaretskaiamariav automaticanalysisoftreadmillrunningtoestimatetimestofatigueandexhaustioninrodents
AT rusyniakdaniele automaticanalysisoftreadmillrunningtoestimatetimestofatigueandexhaustioninrodents