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A power law distribution of metabolite abundance levels in mice regardless of the time and spatial scale of analysis

Biomolecule abundance levels change with the environment and enable a living system to adapt to the new conditions. Although, the living system maintains at least some characteristics, e.g. homeostasis. One of the characteristics maintained by a living system is a power law distribution of biomolecu...

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Autores principales: Sato, Shumpei, Horikawa, Makoto, Kondo, Takeshi, Sato, Tomohito, Setou, Mitsutoshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6037760/
https://www.ncbi.nlm.nih.gov/pubmed/29985415
http://dx.doi.org/10.1038/s41598-018-28667-5
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author Sato, Shumpei
Horikawa, Makoto
Kondo, Takeshi
Sato, Tomohito
Setou, Mitsutoshi
author_facet Sato, Shumpei
Horikawa, Makoto
Kondo, Takeshi
Sato, Tomohito
Setou, Mitsutoshi
author_sort Sato, Shumpei
collection PubMed
description Biomolecule abundance levels change with the environment and enable a living system to adapt to the new conditions. Although, the living system maintains at least some characteristics, e.g. homeostasis. One of the characteristics maintained by a living system is a power law distribution of biomolecule abundance levels. Previous studies have pointed to a universal characteristic of biochemical reaction networks, with data obtained from lysates of multiple cells. As a result, the spatial scale of the data related to the power law distribution of biomolecule abundance levels is not clear. In this study, we researched the scaling law of metabolites in mouse tissue with a spatial scale of quantification that was changed stepwise between a whole-tissue section and a single-point analysis (25 μm). As a result, metabolites in mouse tissues were found to follow the power law distribution independently of the spatial scale of analysis. Additionally, we tested the temporal changes by comparing data from younger and older mice. Both followed similar power law distributions, indicating that metabolite composition is not diversified by aging to disrupt the power law distribution. The power law distribution of metabolite abundance is thus a robust characteristic of a living system regardless of time and space.
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spelling pubmed-60377602018-07-12 A power law distribution of metabolite abundance levels in mice regardless of the time and spatial scale of analysis Sato, Shumpei Horikawa, Makoto Kondo, Takeshi Sato, Tomohito Setou, Mitsutoshi Sci Rep Article Biomolecule abundance levels change with the environment and enable a living system to adapt to the new conditions. Although, the living system maintains at least some characteristics, e.g. homeostasis. One of the characteristics maintained by a living system is a power law distribution of biomolecule abundance levels. Previous studies have pointed to a universal characteristic of biochemical reaction networks, with data obtained from lysates of multiple cells. As a result, the spatial scale of the data related to the power law distribution of biomolecule abundance levels is not clear. In this study, we researched the scaling law of metabolites in mouse tissue with a spatial scale of quantification that was changed stepwise between a whole-tissue section and a single-point analysis (25 μm). As a result, metabolites in mouse tissues were found to follow the power law distribution independently of the spatial scale of analysis. Additionally, we tested the temporal changes by comparing data from younger and older mice. Both followed similar power law distributions, indicating that metabolite composition is not diversified by aging to disrupt the power law distribution. The power law distribution of metabolite abundance is thus a robust characteristic of a living system regardless of time and space. Nature Publishing Group UK 2018-07-09 /pmc/articles/PMC6037760/ /pubmed/29985415 http://dx.doi.org/10.1038/s41598-018-28667-5 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Sato, Shumpei
Horikawa, Makoto
Kondo, Takeshi
Sato, Tomohito
Setou, Mitsutoshi
A power law distribution of metabolite abundance levels in mice regardless of the time and spatial scale of analysis
title A power law distribution of metabolite abundance levels in mice regardless of the time and spatial scale of analysis
title_full A power law distribution of metabolite abundance levels in mice regardless of the time and spatial scale of analysis
title_fullStr A power law distribution of metabolite abundance levels in mice regardless of the time and spatial scale of analysis
title_full_unstemmed A power law distribution of metabolite abundance levels in mice regardless of the time and spatial scale of analysis
title_short A power law distribution of metabolite abundance levels in mice regardless of the time and spatial scale of analysis
title_sort power law distribution of metabolite abundance levels in mice regardless of the time and spatial scale of analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6037760/
https://www.ncbi.nlm.nih.gov/pubmed/29985415
http://dx.doi.org/10.1038/s41598-018-28667-5
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