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A biological perspective towards a standard for information exchange and reporting in XAS

The complex structural landscape of biological samples and their sensitivity to X-ray exposure leads to specific challenges in biological X-ray absorption spectroscopy (bio-XAS) research, which in turn has necessitated standardization of various aspects of bio-XAS data measurement, analysis and inte...

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Detalles Bibliográficos
Autor principal: Sarangi, Ritimukta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6038602/
https://www.ncbi.nlm.nih.gov/pubmed/29979154
http://dx.doi.org/10.1107/S1600577518008779
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author Sarangi, Ritimukta
author_facet Sarangi, Ritimukta
author_sort Sarangi, Ritimukta
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description The complex structural landscape of biological samples and their sensitivity to X-ray exposure leads to specific challenges in biological X-ray absorption spectroscopy (bio-XAS) research, which in turn has necessitated standardization of various aspects of bio-XAS data measurement, analysis and interpretation. The bio-XAS community is therefore well suited for the development of a data-reporting standard with the specific aim of creating a feedback loop for improving/standardizing data analysis protocols and optionally to make published data available to collaborators/researchers in a meaningful and quantitative format. The XIF (XAFS information file) reporting format presented here contains key experimental and analysis parameters, useful in developing a consistent platform for bio-XAS research worldwide. Such a reporting standard, enforced by the user community and publishing groups alike, can be an important step towards the standardization of data measurement and analysis techniques in bio-XAS.
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spelling pubmed-60386022018-07-12 A biological perspective towards a standard for information exchange and reporting in XAS Sarangi, Ritimukta J Synchrotron Radiat Q2xafs2017 Workshop The complex structural landscape of biological samples and their sensitivity to X-ray exposure leads to specific challenges in biological X-ray absorption spectroscopy (bio-XAS) research, which in turn has necessitated standardization of various aspects of bio-XAS data measurement, analysis and interpretation. The bio-XAS community is therefore well suited for the development of a data-reporting standard with the specific aim of creating a feedback loop for improving/standardizing data analysis protocols and optionally to make published data available to collaborators/researchers in a meaningful and quantitative format. The XIF (XAFS information file) reporting format presented here contains key experimental and analysis parameters, useful in developing a consistent platform for bio-XAS research worldwide. Such a reporting standard, enforced by the user community and publishing groups alike, can be an important step towards the standardization of data measurement and analysis techniques in bio-XAS. International Union of Crystallography 2018-06-27 /pmc/articles/PMC6038602/ /pubmed/29979154 http://dx.doi.org/10.1107/S1600577518008779 Text en © Ritimukta Sarangi 2018 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/
spellingShingle Q2xafs2017 Workshop
Sarangi, Ritimukta
A biological perspective towards a standard for information exchange and reporting in XAS
title A biological perspective towards a standard for information exchange and reporting in XAS
title_full A biological perspective towards a standard for information exchange and reporting in XAS
title_fullStr A biological perspective towards a standard for information exchange and reporting in XAS
title_full_unstemmed A biological perspective towards a standard for information exchange and reporting in XAS
title_short A biological perspective towards a standard for information exchange and reporting in XAS
title_sort biological perspective towards a standard for information exchange and reporting in xas
topic Q2xafs2017 Workshop
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6038602/
https://www.ncbi.nlm.nih.gov/pubmed/29979154
http://dx.doi.org/10.1107/S1600577518008779
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